Canonical Allele Identifier: CA256553
Gene: SOX2 HGNC NCBI
SOX2-OT HGNC NCBI

Linked Data

ClinVar Variation Id: 12814
ClinVar RCV Id: RCV000013662
dbSNP Id: rs104893799

Genomic Alleles

HGVS Genome Assembly
NC_000003.12:g.181712889C>T , CM000665.2:g.181712889C>T GRCh38
NC_000003.11:g.181430677C>T , CM000665.1:g.181430677C>T GRCh37
NC_000003.10:g.182913371C>T NCBI36
NG_009080.1:g.5956C>T , LRG_719:g.5956C>T

Transcript Alleles

HGVS Amino-acid change
ENST00000325404.3:c.529C>T (SOX2) MANE Select ENSP00000323588.1:p.Gln177Ter
ENST00000325404.2:c.529C>T (SOX2) ENSP00000323588.1:p.Gln177Ter
NM_003106.3:c.529C>T (SOX2) NP_003097.1:p.Gln177Ter
NR_004053.3:n.768-2296C>T (SOX2-OT)
NR_075089.1:n.767+13006C>T (SOX2-OT)
NR_075090.1:n.482-26680C>T (SOX2-OT)
NR_075091.1:n.783-2296C>T (SOX2-OT)
NR_075092.1:n.782+13006C>T (SOX2-OT)
NR_075093.1:n.473-26680C>T (SOX2-OT)
NM_003106.4:c.529C>T (SOX2) MANE Select NP_003097.1:p.Gln177Ter