Canonical Allele Identifier: CA553621
Gene: NPHP4 HGNC NCBI

Linked Data

ClinVar Variation Id: 499211
dbSNP Id: rs371527260
gnomAD v2: 1-5927855-C-T
gnomAD v3: 1-5867795-C-T
gnomAD v4: 1-5867795-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.5867795C>T , CM000663.2:g.5867795C>T GRCh38
NC_000001.10:g.5927855C>T , CM000663.1:g.5927855C>T GRCh37
NC_000001.9:g.5850442C>T NCBI36
NG_011724.2:g.129677G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000378156.9:c.3417G>A MANE Select ENSP00000367398.4:p.Pro1139=
ENST00000378156.8:c.3417G>A ENSP00000367398.4:p.Pro1139=
ENST00000378161.5:n.581G>A
ENST00000378169.7:c.*2318G>A ENSP00000367411.3:n.*2318G>A
ENST00000468253.1:n.692G>A
ENST00000478423.6:n.3149G>A
ENST00000489180.6:c.*1228G>A ENSP00000423747.1:n.*1228G>A
NM_001291593.1:c.1878G>A NP_001278522.1:p.Pro626=
NM_001291594.1:c.1881G>A NP_001278523.1:p.Pro627=
NM_015102.4:c.3417G>A NP_055917.1:p.Pro1139=
NR_111987.1:n.4232G>A
XM_006710563.2:c.3417G>A XP_006710626.1:p.Pro1139=
XM_006710565.2:c.3417G>A XP_006710628.1:p.Pro1139=
XM_011541213.1:c.3414G>A XP_011539515.1:p.Pro1138=
XM_011541214.1:c.3375G>A XP_011539516.1:p.Pro1125=
XM_011541215.1:c.3306G>A XP_011539517.1:p.Pro1102=
XM_011541216.1:c.3417G>A XP_011539518.1:p.Pro1139=
XM_011541217.1:c.3417G>A XP_011539519.1:p.Pro1139=
XM_011541218.1:c.3417G>A XP_011539520.1:p.Pro1139=
XM_011541219.1:c.3363G>A XP_011539521.1:p.Pro1121=
XM_011541220.1:c.3417G>A XP_011539522.1:p.Pro1139=
XR_946604.1:n.3268G>A
XM_006710563.3:c.3417G>A XP_006710626.1:p.Pro1139=
XM_011541216.2:c.3417G>A XP_011539518.1:p.Pro1139=
XM_011541217.2:c.3417G>A XP_011539519.1:p.Pro1139=
XM_011541218.2:c.3417G>A XP_011539520.1:p.Pro1139=
XM_017000996.1:c.3372G>A XP_016856485.1:p.Pro1124=
XM_017000997.1:c.3417G>A XP_016856486.1:p.Pro1139=
XM_017000998.1:c.3417G>A XP_016856487.1:p.Pro1139=
XM_017000999.1:c.2889G>A XP_016856488.1:p.Pro963=
XM_017001000.2:c.2889G>A XP_016856489.1:p.Pro963=
XM_017001001.1:c.2619G>A XP_016856490.1:p.Pro873=
XM_017001003.1:c.1878G>A XP_016856492.1:p.Pro626=
XR_001737114.1:n.3455G>A
XR_001737115.1:n.3268G>A
NM_015102.5:c.3417G>A MANE Select NP_055917.1:p.Pro1139=
NM_001291593.2:c.1878G>A NP_001278522.1:p.Pro626=
NM_001291594.2:c.1881G>A NP_001278523.1:p.Pro627=
NR_111987.2:n.4184G>A