Canonical Allele Identifier: CA426121317

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 1638963
• ClinVar RCV Id: RCV002126582 ; RCV002427694
• dbSNP Id: rs2104394501
• COSMIC: COSM6475216
• MyVariant Identifiers: chr2:g.48027336G>T (hg19)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47800197G>T , CM000664.2:g.47800197G>T	GRCh38
NC_000002.11:g.48027336G>T , CM000664.1:g.48027336G>T	GRCh37
NC_000002.10:g.47880840G>T	NCBI36
NG_007111.1:g.22051G>T , LRG_219:g.22051G>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.1917G>T (MSH6)	ENSP00000406248.2:p.Val639=
ENST00000420813.6:c.1917G>T (MSH6)	ENSP00000390382.2:p.Val639=
ENST00000455383.6:c.1917G>T (MSH6)	ENSP00000397484.2:p.Val639=
ENST00000700004.2:c.2214G>T (MSH6)	ENSP00000514752.2:p.Val738=
ENST00000699999.1:n.2298G>T (MSH6)
ENST00000700000.1:c.1606+608G>T (MSH6)	ENSP00000514749.1:n.1606+608G>T
ENST00000700002.1:c.2220G>T (MSH6)	ENSP00000514750.1:p.Val740=
ENST00000700003.1:c.628-3223G>T (MSH6)	ENSP00000514751.1:n.628-3223G>T
ENST00000700004.1:c.1371G>T (MSH6)	ENSP00000514752.1:p.Val457=
ENST00000234420.11:c.2214G>T (MSH6) MANE Select	ENSP00000234420.5:p.Val738=
ENST00000540021.6:c.1824G>T (MSH6)	ENSP00000446475.1:p.Val608=
ENST00000652107.1:c.1917G>T (MSH6)	ENSP00000498629.1:p.Val639=
ENST00000673637.1:c.1917G>T (MSH6)	ENSP00000501310.1:p.Val639=
ENST00000234420.9:c.2214G>T (MSH6)	ENSP00000234420.4:p.Val738=
ENST00000405808.5:c.169+7998C>A (FBXO11)	ENSP00000385127.1:n.169+7998C>A
ENST00000434234.5:c.*124+7797C>A (FBXO11)	ENSP00000402692.1:n.*124+7797C>A
ENST00000445503.5:c.*1561G>T (MSH6)	ENSP00000405294.1:n.*1561G>T
ENST00000538136.1:c.1308G>T (MSH6)	ENSP00000438580.1:p.Val436=
ENST00000540021.5:c.1824G>T (MSH6)	ENSP00000446475.1:p.Val608=
ENST00000614496.4:c.1308G>T (MSH6)	ENSP00000477844.1:p.Val436=
ENST00000616033.4:c.2211G>T (MSH6)	ENSP00000480261.1:p.Val737=
ENST00000622629.4:c.-883G>T (MSH6)	ENSP00000482078.1:n.-883G>T
NM_000179.2:c.2214G>T , LRG_219t1:c.2214G>T (MSH6)	NP_000170.1:p.Val738=
NM_001281492.1:c.1824G>T (MSH6)	NP_001268421.1:p.Val608=
NM_001281493.1:c.1308G>T (MSH6)	NP_001268422.1:p.Val436=
NM_001281494.1:c.1308G>T (MSH6)	NP_001268423.1:p.Val436=
XM_005264271.1:c.1917G>T (MSH6)	XP_005264328.1:p.Val639=
XM_011532798.1:c.2031G>T (MSH6)	XP_011531100.1:p.Val677=
XM_011532799.1:c.1917G>T (MSH6)	XP_011531101.1:p.Val639=
XM_011532800.1:c.1917G>T (MSH6)	XP_011531102.1:p.Val639=
XM_024452819.1:c.2214G>T (MSH6)	XP_024308587.1:p.Val738=
XM_024452820.1:c.2031G>T (MSH6)	XP_024308588.1:p.Val677=
XM_024452821.1:c.1917G>T (MSH6)	XP_024308589.1:p.Val639=
XM_024452822.1:c.1308G>T (MSH6)	XP_024308590.1:p.Val436=
NM_000179.3:c.2214G>T (MSH6) MANE Select	NP_000170.1:p.Val738=
NM_001281492.2:c.1824G>T (MSH6)	NP_001268421.1:p.Val608=
NM_001281493.2:c.1308G>T (MSH6)	NP_001268422.1:p.Val436=
NM_001281494.2:c.1308G>T (MSH6)	NP_001268423.1:p.Val436=