Canonical Allele Identifier: CA373798460

Gene: SPTLC1

Linked Data

• MyVariant Identifiers: chr9:g.94830275T>A (hg19) ; chr9:g.92067993T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000009.12:g.92067993T>A , CM000671.2:g.92067993T>A	GRCh38
NC_000009.11:g.94830275T>A , CM000671.1:g.94830275T>A	GRCh37
NC_000009.10:g.93870096T>A	NCBI36
NG_007950.1:g.52416A>T , LRG_272:g.52416A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000482632.6:n.943A>T
ENST00000686600.1:c.533A>T	ENSP00000509268.1:p.Tyr178Phe
ENST00000686799.1:n.630A>T
ENST00000687427.1:c.533A>T	ENSP00000509426.1:p.Tyr178Phe
ENST00000687817.1:c.*336A>T	ENSP00000508926.1:n.*336A>T
ENST00000687972.1:c.593A>T	ENSP00000509208.1:p.Tyr198Phe
ENST00000689261.1:n.440A>T
ENST00000689401.1:c.*783A>T	ENSP00000510251.1:n.*783A>T
ENST00000689423.1:c.*783A>T	ENSP00000508519.1:n.*783A>T
ENST00000690095.1:n.861A>T
ENST00000690139.1:c.*234A>T	ENSP00000510483.1:n.*234A>T
ENST00000692458.1:n.556A>T
ENST00000693147.1:c.*549A>T	ENSP00000510358.1:n.*549A>T
ENST00000262554.7:c.533A>T MANE Select	ENSP00000262554.2:p.Tyr178Phe
ENST00000642671.1:c.578A>T	ENSP00000495764.1:n.578A>T
ENST00000643599.1:c.405A>T	ENSP00000494770.1:n.405A>T
ENST00000644140.1:c.*274A>T	ENSP00000493933.1:n.*274A>T
ENST00000646481.1:c.405A>T	ENSP00000496627.1:n.405A>T
ENST00000646534.1:c.*336A>T	ENSP00000495388.1:n.*336A>T
ENST00000262554.6:c.533A>T	ENSP00000262554.2:p.Tyr178Phe
ENST00000482632.5:n.680A>T
NM_001281303.1:c.533A>T	NP_001268232.1:p.Tyr178Phe
NM_006415.3:c.533A>T	NP_006406.1:p.Tyr178Phe
XM_011518138.1:c.533A>T	XP_011516440.1:p.Tyr178Phe
XM_011518139.1:c.68A>T	XP_011516441.1:p.Tyr23Phe
XM_011518138.2:c.533A>T	XP_011516440.1:p.Tyr178Phe
XM_011518139.3:c.68A>T	XP_011516441.1:p.Tyr23Phe
XM_017014200.2:c.167A>T	XP_016869689.1:p.Tyr56Phe
XM_017014201.2:c.167A>T	XP_016869690.1:p.Tyr56Phe
XM_024447378.1:c.68A>T	XP_024303146.1:p.Tyr23Phe
XM_024447379.1:c.68A>T	XP_024303147.1:p.Tyr23Phe
XR_002956744.1:n.683A>T
NM_006415.4:c.533A>T MANE Select	NP_006406.1:p.Tyr178Phe
NM_001281303.2:c.533A>T	NP_001268232.1:p.Tyr178Phe
NM_001368272.1:c.167A>T	NP_001355201.1:p.Tyr56Phe
NM_001368273.1:c.68A>T	NP_001355202.1:p.Tyr23Phe