Canonical Allele Identifier: CA349042816

Gene: SCN3A SCN2A

Linked Data

• MyVariant Identifiers: chr2:g.165986709A>T (hg19) ; chr2:g.165130199A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.165130199A>T , CM000664.2:g.165130199A>T	GRCh38
NC_000002.11:g.165986709A>T , CM000664.1:g.165986709A>T	GRCh37
NC_000002.10:g.165694955A>T	NCBI36
NG_042289.1:g.78890T>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000706067.1:c.2612T>A (SCN3A)	ENSP00000516211.1:p.Val871Glu
ENST00000283254.12:c.2663T>A (SCN3A) MANE Select	ENSP00000283254.7:p.Val888Glu
ENST00000638473.1:c.*504T>A (SCN3A)	ENSP00000491552.1:n.*504T>A
ENST00000639244.1:c.2612T>A (SCN3A)	ENSP00000492251.1:p.Val871Glu
ENST00000640652.1:c.2612T>A (SCN3A)	ENSP00000492807.1:p.Val871Glu
ENST00000658209.1:c.761T>A (SCN3A)	ENSP00000499598.1:p.Val254Glu
ENST00000668657.1:c.2525T>A (SCN3A)	ENSP00000499420.1:p.Val842Glu
ENST00000283254.11:c.2663T>A (SCN3A)	ENSP00000283254.7:p.Val888Glu
ENST00000360093.7:c.2663T>A (SCN3A)	ENSP00000353206.3:p.Val888Glu
ENST00000409101.7:c.2516T>A (SCN3A)	ENSP00000386726.3:p.Val839Glu
ENST00000440431.6:c.2516T>A (SCN3A)	ENSP00000403348.1:p.Val839Glu
NM_001081676.1:c.2516T>A (SCN3A)	NP_001075145.1:p.Val839Glu
NM_001081677.1:c.2516T>A (SCN3A)	NP_001075146.1:p.Val839Glu
NM_006922.3:c.2663T>A (SCN3A)	NP_008853.3:p.Val888Glu
XM_005246750.2:c.-130A>T (SCN2A)	XP_005246807.1:n.-130A>T
XM_006712679.1:c.2663T>A (SCN3A)	XP_006712742.1:p.Val888Glu
XM_011511608.1:c.-398A>T (SCN2A)	XP_011509910.1:n.-398A>T
XM_011511609.1:c.-283A>T (SCN2A)	XP_011509911.1:n.-283A>T
XM_011511610.1:c.2663T>A (SCN3A)	XP_011509912.1:p.Val888Glu
XM_011511611.1:c.2663T>A (SCN3A)	XP_011509913.1:p.Val888Glu
XM_011511612.1:c.2612T>A (SCN3A)	XP_011509914.1:p.Val871Glu
XM_011511613.1:c.773T>A (SCN3A)	XP_011509915.1:p.Val258Glu
XM_011511614.1:c.2663T>A (SCN3A)	XP_011509916.1:p.Val888Glu
XM_011511610.3:c.2663T>A (SCN3A)	XP_011509912.1:p.Val888Glu
XM_011511613.3:c.773T>A (SCN3A)	XP_011509915.1:p.Val258Glu
XM_017004660.2:c.2663T>A (SCN3A)	XP_016860149.1:p.Val888Glu
XM_017004661.2:c.2612T>A (SCN3A)	XP_016860150.1:p.Val871Glu
XM_017004662.2:c.2525T>A (SCN3A)	XP_016860151.1:p.Val842Glu
XM_017004663.2:c.773T>A (SCN3A)	XP_016860152.1:p.Val258Glu
XM_017004664.1:c.2663T>A (SCN3A)	XP_016860153.1:p.Val888Glu
XM_017004665.1:c.2525T>A (SCN3A)	XP_016860154.1:p.Val842Glu
XM_017004666.1:c.2516T>A (SCN3A)	XP_016860155.1:p.Val839Glu
NM_006922.4:c.2663T>A (SCN3A) MANE Select	NP_008853.3:p.Val888Glu
NM_001081676.2:c.2516T>A (SCN3A)	NP_001075145.1:p.Val839Glu
NM_001081677.2:c.2516T>A (SCN3A)	NP_001075146.1:p.Val839Glu