Canonical Allele Identifier: CA349042766

Gene: SCN3A SCN2A

Linked Data

• MyVariant Identifiers: chr2:g.165986686A>T (hg19) ; chr2:g.165130176A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.165130176A>T , CM000664.2:g.165130176A>T	GRCh38
NC_000002.11:g.165986686A>T , CM000664.1:g.165986686A>T	GRCh37
NC_000002.10:g.165694932A>T	NCBI36
NG_042289.1:g.78913T>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000706067.1:c.2635T>A (SCN3A)	ENSP00000516211.1:p.Phe879Ile
ENST00000283254.12:c.2686T>A (SCN3A) MANE Select	ENSP00000283254.7:p.Phe896Ile
ENST00000638473.1:c.*527T>A (SCN3A)	ENSP00000491552.1:n.*527T>A
ENST00000639244.1:c.2635T>A (SCN3A)	ENSP00000492251.1:p.Phe879Ile
ENST00000640652.1:c.2635T>A (SCN3A)	ENSP00000492807.1:p.Phe879Ile
ENST00000658209.1:c.784T>A (SCN3A)	ENSP00000499598.1:p.Phe262Ile
ENST00000668657.1:c.2548T>A (SCN3A)	ENSP00000499420.1:p.Phe850Ile
ENST00000283254.11:c.2686T>A (SCN3A)	ENSP00000283254.7:p.Phe896Ile
ENST00000360093.7:c.2686T>A (SCN3A)	ENSP00000353206.3:p.Phe896Ile
ENST00000409101.7:c.2539T>A (SCN3A)	ENSP00000386726.3:p.Phe847Ile
ENST00000440431.6:c.2539T>A (SCN3A)	ENSP00000403348.1:p.Phe847Ile
NM_001081676.1:c.2539T>A (SCN3A)	NP_001075145.1:p.Phe847Ile
NM_001081677.1:c.2539T>A (SCN3A)	NP_001075146.1:p.Phe847Ile
NM_006922.3:c.2686T>A (SCN3A)	NP_008853.3:p.Phe896Ile
XM_005246750.2:c.-153A>T (SCN2A)	XP_005246807.1:n.-153A>T
XM_006712679.1:c.2686T>A (SCN3A)	XP_006712742.1:p.Phe896Ile
XM_011511608.1:c.-421A>T (SCN2A)	XP_011509910.1:n.-421A>T
XM_011511609.1:c.-306A>T (SCN2A)	XP_011509911.1:n.-306A>T
XM_011511610.1:c.2686T>A (SCN3A)	XP_011509912.1:p.Phe896Ile
XM_011511611.1:c.2686T>A (SCN3A)	XP_011509913.1:p.Phe896Ile
XM_011511612.1:c.2635T>A (SCN3A)	XP_011509914.1:p.Phe879Ile
XM_011511613.1:c.796T>A (SCN3A)	XP_011509915.1:p.Phe266Ile
XM_011511614.1:c.2686T>A (SCN3A)	XP_011509916.1:p.Phe896Ile
XM_011511610.3:c.2686T>A (SCN3A)	XP_011509912.1:p.Phe896Ile
XM_011511613.3:c.796T>A (SCN3A)	XP_011509915.1:p.Phe266Ile
XM_017004660.2:c.2686T>A (SCN3A)	XP_016860149.1:p.Phe896Ile
XM_017004661.2:c.2635T>A (SCN3A)	XP_016860150.1:p.Phe879Ile
XM_017004662.2:c.2548T>A (SCN3A)	XP_016860151.1:p.Phe850Ile
XM_017004663.2:c.796T>A (SCN3A)	XP_016860152.1:p.Phe266Ile
XM_017004664.1:c.2686T>A (SCN3A)	XP_016860153.1:p.Phe896Ile
XM_017004665.1:c.2548T>A (SCN3A)	XP_016860154.1:p.Phe850Ile
XM_017004666.1:c.2539T>A (SCN3A)	XP_016860155.1:p.Phe847Ile
NM_006922.4:c.2686T>A (SCN3A) MANE Select	NP_008853.3:p.Phe896Ile
NM_001081676.2:c.2539T>A (SCN3A)	NP_001075145.1:p.Phe847Ile
NM_001081677.2:c.2539T>A (SCN3A)	NP_001075146.1:p.Phe847Ile