Canonical Allele Identifier: CA346761717

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 570267
• ClinVar RCV Id: RCV000691090 ; RCV002325380
• dbSNP Id: rs1558395737
• gnomAD v4: 2-47806828-C-T
• MyVariant Identifiers: chr2:g.48033967C>T (hg19) ; chr2:g.47806828C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47806828C>T , CM000664.2:g.47806828C>T	GRCh38
NC_000002.11:g.48033967C>T , CM000664.1:g.48033967C>T	GRCh37
NC_000002.10:g.47887471C>T	NCBI36
NG_007111.1:g.28682C>T , LRG_219:g.28682C>T
NG_008397.1:g.103848G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.3754C>T (MSH6)	ENSP00000406248.2:p.His1252Tyr
ENST00000420813.6:c.3754C>T (MSH6)	ENSP00000390382.2:p.His1252Tyr
ENST00000455383.6:c.3754C>T (MSH6)	ENSP00000397484.2:p.His1252Tyr
ENST00000700004.2:c.3667C>T (MSH6)	ENSP00000514752.2:p.His1223Tyr
ENST00000699999.1:n.4725C>T (MSH6)
ENST00000700000.1:c.2485C>T (MSH6)	ENSP00000514749.1:p.His829Tyr
ENST00000700002.1:c.4057C>T (MSH6)	ENSP00000514750.1:p.His1353Tyr
ENST00000700003.1:c.1506C>T (MSH6)	ENSP00000514751.1:n.1506C>T
ENST00000700004.1:c.2824C>T (MSH6)	ENSP00000514752.1:p.His942Tyr
ENST00000700005.1:n.3029C>T (MSH6)
ENST00000700007.1:n.2646C>T (MSH6)
ENST00000700008.1:n.2313C>T (MSH6)
ENST00000700009.1:n.2715C>T (MSH6)
ENST00000700010.1:n.1460C>T (MSH6)
ENST00000700011.1:n.3345C>T (MSH6)
ENST00000682451.1:n.3920G>A (FBXO11)
ENST00000684712.1:n.4182G>A (FBXO11)
ENST00000234420.11:c.4051C>T (MSH6) MANE Select	ENSP00000234420.5:p.His1351Tyr
ENST00000540021.6:c.3661C>T (MSH6)	ENSP00000446475.1:p.His1221Tyr
ENST00000652107.1:c.3754C>T (MSH6)	ENSP00000498629.1:p.His1252Tyr
ENST00000673637.1:c.3754C>T (MSH6)	ENSP00000501310.1:p.His1252Tyr
ENST00000234420.9:c.4051C>T (MSH6)	ENSP00000234420.4:p.His1351Tyr
ENST00000405808.5:c.169+1367G>A (FBXO11)	ENSP00000385127.1:n.169+1367G>A
ENST00000434234.5:c.*124+1166G>A (FBXO11)	ENSP00000402692.1:n.*124+1166G>A
ENST00000445503.5:c.*3398C>T (MSH6)	ENSP00000405294.1:n.*3398C>T
ENST00000465204.5:n.3082G>A (FBXO11)
ENST00000538136.1:c.3145C>T (MSH6)	ENSP00000438580.1:p.His1049Tyr
ENST00000540021.5:c.3661C>T (MSH6)	ENSP00000446475.1:p.His1221Tyr
ENST00000614496.4:c.3145C>T (MSH6)	ENSP00000477844.1:p.His1049Tyr
ENST00000622629.4:c.952C>T (MSH6)	ENSP00000482078.1:p.His318Tyr
NM_000179.2:c.4051C>T , LRG_219t1:c.4051C>T (MSH6)	NP_000170.1:p.His1351Tyr
NM_001281492.1:c.3661C>T (MSH6)	NP_001268421.1:p.His1221Tyr
NM_001281493.1:c.3145C>T (MSH6)	NP_001268422.1:p.His1049Tyr
NM_001281494.1:c.3145C>T (MSH6)	NP_001268423.1:p.His1049Tyr
XM_005264271.1:c.3754C>T (MSH6)	XP_005264328.1:p.His1252Tyr
XM_011532798.1:c.3868C>T (MSH6)	XP_011531100.1:p.His1290Tyr
XM_011532799.1:c.3754C>T (MSH6)	XP_011531101.1:p.His1252Tyr
XM_011532800.1:c.3754C>T (MSH6)	XP_011531102.1:p.His1252Tyr
XM_024452819.1:c.4144C>T (MSH6)	XP_024308587.1:p.His1382Tyr
XM_024452820.1:c.3961C>T (MSH6)	XP_024308588.1:p.His1321Tyr
XM_024452821.1:c.3847C>T (MSH6)	XP_024308589.1:p.His1283Tyr
XM_024452822.1:c.3238C>T (MSH6)	XP_024308590.1:p.His1080Tyr
NM_000179.3:c.4051C>T (MSH6) MANE Select	NP_000170.1:p.His1351Tyr
NM_001281492.2:c.3661C>T (MSH6)	NP_001268421.1:p.His1221Tyr
NM_001281493.2:c.3145C>T (MSH6)	NP_001268422.1:p.His1049Tyr
NM_001281494.2:c.3145C>T (MSH6)	NP_001268423.1:p.His1049Tyr