Canonical Allele Identifier: CA340171640
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46189985C>A , CM000663.2:g.46189985C>A GRCh38
NC_000001.10:g.46655657C>A , CM000663.1:g.46655657C>A GRCh37
NC_000001.9:g.46428244C>A NCBI36
NG_009205.2:g.35321G>T
NG_009205.3:g.35321G>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.1654G>T (POMGNT1) ENSP00000379698.4:p.Ala552Ser
ENST00000497439.6:n.1826G>T (POMGNT1)
ENST00000684817.1:n.2014G>T (POMGNT1)
ENST00000684898.1:n.2216G>T (POMGNT1)
ENST00000685230.1:c.*964G>T (POMGNT1) ENSP00000510305.1:n.*964G>T
ENST00000685275.1:n.2201G>T (POMGNT1)
ENST00000685444.1:c.1555G>T (POMGNT1) ENSP00000510762.1:p.Ala519Ser
ENST00000685704.1:n.2320G>T (POMGNT1)
ENST00000685833.1:n.4047G>T (POMGNT1)
ENST00000686252.1:n.2728G>T (POMGNT1)
ENST00000686379.1:c.*778G>T (POMGNT1) ENSP00000508913.1:n.*778G>T
ENST00000686724.1:n.3341G>T (POMGNT1)
ENST00000686737.1:c.1654G>T (POMGNT1) ENSP00000508736.1:p.Ala552Ser
ENST00000687112.1:n.2520G>T (POMGNT1)
ENST00000687149.1:c.1693G>T (POMGNT1) ENSP00000509745.1:p.Ala565Ser
ENST00000687197.1:c.*594G>T (POMGNT1) ENSP00000510749.1:n.*594G>T
ENST00000687235.1:n.3731G>T (POMGNT1)
ENST00000687613.1:n.2294G>T (POMGNT1)
ENST00000687683.1:c.1654G>T (POMGNT1) ENSP00000508522.1:p.Ala552Ser
ENST00000688032.1:n.2191G>T (POMGNT1)
ENST00000688596.1:n.2305G>T (POMGNT1)
ENST00000688608.1:c.1555G>T (POMGNT1) ENSP00000508890.1:p.Ala519Ser
ENST00000689031.1:n.2106G>T (POMGNT1)
ENST00000689756.1:c.*1286G>T (POMGNT1) ENSP00000509023.1:n.*1286G>T
ENST00000690377.1:n.2001G>T (POMGNT1)
ENST00000690678.1:c.1654G>T (POMGNT1) ENSP00000508703.1:p.Ala552Ser
ENST00000691209.1:c.*594G>T (POMGNT1) ENSP00000510112.1:n.*594G>T
ENST00000691243.1:c.*45G>T (POMGNT1) ENSP00000510654.1:n.*45G>T
ENST00000692202.1:n.2229G>T (POMGNT1)
ENST00000692322.1:c.*1441G>T (POMGNT1) ENSP00000509017.1:n.*1441G>T
ENST00000692369.1:c.1654G>T (POMGNT1) ENSP00000508453.1:p.Ala552Ser
ENST00000692599.1:n.3529G>T (POMGNT1)
ENST00000692635.1:c.*529G>T (POMGNT1) ENSP00000508425.1:n.*529G>T
ENST00000693168.1:n.3430G>T (POMGNT1)
ENST00000693218.1:c.*215G>T (POMGNT1) ENSP00000510577.1:n.*215G>T
ENST00000693223.1:n.2602G>T (POMGNT1)
ENST00000371984.8:c.1654G>T (POMGNT1) MANE Select ENSP00000361052.3:p.Ala552Ser
ENST00000371984.7:c.1654G>T (POMGNT1) ENSP00000361052.3:p.Ala552Ser
ENST00000371992.1:c.1654G>T (POMGNT1) ENSP00000361060.1:p.Ala552Ser
ENST00000396420.7:c.*1323G>T (POMGNT1) ENSP00000379698.3:n.*1323G>T
ENST00000480972.1:n.303G>T (POMGNT1)
NM_001243766.1:c.1654G>T (POMGNT1) NP_001230695.1:p.Ala552Ser
NM_001290129.1:c.1588G>T (POMGNT1) NP_001277058.1:p.Ala530Ser
NM_001290130.1:c.1225G>T (POMGNT1) NP_001277059.1:p.Ala409Ser
NM_017739.3:c.1654G>T (POMGNT1) NP_060209.3:p.Ala552Ser
XM_005271010.1:c.1654G>T (POMGNT1) XP_005271067.1:p.Ala552Ser
XM_006710755.1:c.1654G>T (POMGNT1) XP_006710818.1:p.Ala552Ser
XM_006710756.1:c.1654G>T (POMGNT1) XP_006710819.1:p.Ala552Ser
XM_011540460.1:c.678+4677C>A (TSPAN1) XP_011538762.1:n.678+4677C>A
XM_011540461.1:c.633+4677C>A (TSPAN1) XP_011538763.1:n.633+4677C>A
XM_011541759.1:c.1588G>T (POMGNT1) XP_011540061.1:p.Ala530Ser
XM_011541760.1:c.1588G>T (POMGNT1) XP_011540062.1:p.Ala530Ser
XM_011541761.1:c.562G>T (POMGNT1) XP_011540063.1:p.Ala188Ser
XM_011540460.3:c.678+4677C>A (TSPAN1) XP_011538762.1:n.678+4677C>A
XM_011541760.3:c.1588G>T (POMGNT1) XP_011540062.1:p.Ala530Ser
XM_017001690.1:c.1654G>T (POMGNT1) XP_016857179.1:p.Ala552Ser
NM_001243766.2:c.1654G>T (POMGNT1) NP_001230695.2:p.Ala552Ser
NM_001290129.2:c.1588G>T (POMGNT1) NP_001277058.2:p.Ala530Ser
NM_001290130.2:c.1225G>T (POMGNT1) NP_001277059.2:p.Ala409Ser
NM_017739.4:c.1654G>T (POMGNT1) MANE Select NP_060209.4:p.Ala552Ser