Canonical Allele Identifier: CA234708
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 167525
dbSNP Id: rs367848204
gnomAD v2: 1-46655194-G-A
gnomAD v3: 1-46189522-G-A
gnomAD v4: 1-46189522-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46189522G>A , CM000663.2:g.46189522G>A GRCh38
NC_000001.10:g.46655194G>A , CM000663.1:g.46655194G>A GRCh37
NC_000001.9:g.46427781G>A NCBI36
NG_009205.2:g.35784C>T
NG_009205.3:g.35784C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.1831C>T (POMGNT1) ENSP00000379698.4:p.Leu611=
ENST00000497439.6:n.2003C>T (POMGNT1)
ENST00000684817.1:n.2191C>T (POMGNT1)
ENST00000684898.1:n.2393C>T (POMGNT1)
ENST00000685230.1:c.*1141C>T (POMGNT1) ENSP00000510305.1:n.*1141C>T
ENST00000685275.1:n.2378C>T (POMGNT1)
ENST00000685444.1:c.1732C>T (POMGNT1) ENSP00000510762.1:p.Leu578=
ENST00000685704.1:n.2497C>T (POMGNT1)
ENST00000685833.1:n.4224C>T (POMGNT1)
ENST00000686252.1:n.2905C>T (POMGNT1)
ENST00000686379.1:c.*955C>T (POMGNT1) ENSP00000508913.1:n.*955C>T
ENST00000686724.1:n.3518C>T (POMGNT1)
ENST00000686737.1:c.1831C>T (POMGNT1) ENSP00000508736.1:p.Leu611=
ENST00000687112.1:n.2697C>T (POMGNT1)
ENST00000687149.1:c.1870C>T (POMGNT1) ENSP00000509745.1:p.Leu624=
ENST00000687197.1:c.*771C>T (POMGNT1) ENSP00000510749.1:n.*771C>T
ENST00000687235.1:n.3908C>T (POMGNT1)
ENST00000687613.1:n.2471C>T (POMGNT1)
ENST00000687683.1:c.1831C>T (POMGNT1) ENSP00000508522.1:p.Leu611=
ENST00000688032.1:n.2368C>T (POMGNT1)
ENST00000688596.1:n.2482C>T (POMGNT1)
ENST00000688608.1:c.1732C>T (POMGNT1) ENSP00000508890.1:p.Leu578=
ENST00000689031.1:n.2283C>T (POMGNT1)
ENST00000689756.1:c.*1463C>T (POMGNT1) ENSP00000509023.1:n.*1463C>T
ENST00000690377.1:n.2178C>T (POMGNT1)
ENST00000690678.1:c.1831C>T (POMGNT1) ENSP00000508703.1:p.Leu611=
ENST00000691185.1:n.302C>T (POMGNT1)
ENST00000691209.1:c.*771C>T (POMGNT1) ENSP00000510112.1:n.*771C>T
ENST00000691243.1:c.*222C>T (POMGNT1) ENSP00000510654.1:n.*222C>T
ENST00000692202.1:n.2406C>T (POMGNT1)
ENST00000692322.1:c.*1618C>T (POMGNT1) ENSP00000509017.1:n.*1618C>T
ENST00000692369.1:c.1831C>T (POMGNT1) ENSP00000508453.1:p.Leu611=
ENST00000692599.1:n.3706C>T (POMGNT1)
ENST00000692635.1:c.*706C>T (POMGNT1) ENSP00000508425.1:n.*706C>T
ENST00000693168.1:n.3607C>T (POMGNT1)
ENST00000693218.1:c.*392C>T (POMGNT1) ENSP00000510577.1:n.*392C>T
ENST00000693223.1:n.2779C>T (POMGNT1)
ENST00000371984.8:c.1831C>T (POMGNT1) MANE Select ENSP00000361052.3:p.Leu611=
ENST00000371984.7:c.1831C>T (POMGNT1) ENSP00000361052.3:p.Leu611=
ENST00000371992.1:c.1831C>T (POMGNT1) ENSP00000361060.1:p.Leu611=
ENST00000396420.7:c.*1500C>T (POMGNT1) ENSP00000379698.3:n.*1500C>T
ENST00000475642.1:n.46C>T (POMGNT1)
ENST00000480972.1:n.480C>T (POMGNT1)
NM_001243766.1:c.1831C>T (POMGNT1) NP_001230695.1:p.Leu611=
NM_001290129.1:c.1765C>T (POMGNT1) NP_001277058.1:p.Leu589=
NM_001290130.1:c.1402C>T (POMGNT1) NP_001277059.1:p.Leu468=
NM_017739.3:c.1831C>T (POMGNT1) NP_060209.3:p.Leu611=
XM_005271010.1:c.1831C>T (POMGNT1) XP_005271067.1:p.Leu611=
XM_006710755.1:c.1831C>T (POMGNT1) XP_006710818.1:p.Leu611=
XM_006710756.1:c.1831C>T (POMGNT1) XP_006710819.1:p.Leu611=
XM_011540460.1:c.678+4214G>A (TSPAN1) XP_011538762.1:n.678+4214G>A
XM_011540461.1:c.633+4214G>A (TSPAN1) XP_011538763.1:n.633+4214G>A
XM_011541759.1:c.1765C>T (POMGNT1) XP_011540061.1:p.Leu589=
XM_011541760.1:c.1765C>T (POMGNT1) XP_011540062.1:p.Leu589=
XM_011541761.1:c.739C>T (POMGNT1) XP_011540063.1:p.Leu247=
XM_011540460.3:c.678+4214G>A (TSPAN1) XP_011538762.1:n.678+4214G>A
XM_011541760.3:c.1765C>T (POMGNT1) XP_011540062.1:p.Leu589=
XM_017001690.1:c.1831C>T (POMGNT1) XP_016857179.1:p.Leu611=
NM_001243766.2:c.1831C>T (POMGNT1) NP_001230695.2:p.Leu611=
NM_001290129.2:c.1765C>T (POMGNT1) NP_001277058.2:p.Leu589=
NM_001290130.2:c.1402C>T (POMGNT1) NP_001277059.2:p.Leu468=
NM_017739.4:c.1831C>T (POMGNT1) MANE Select NP_060209.4:p.Leu611=