Canonical Allele Identifier: CA21910635
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 500726
dbSNP Id: rs386834018
gnomAD v2: 1-46655573-G-T
gnomAD v3: 1-46189901-G-T
gnomAD v4: 1-46189901-G-T

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46189901G>T , CM000663.2:g.46189901G>T GRCh38
NC_000001.10:g.46655573G>T , CM000663.1:g.46655573G>T GRCh37
NC_000001.9:g.46428160G>T NCBI36
NG_009205.2:g.35405C>A
NG_009205.3:g.35405C>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.1738C>A (POMGNT1) ENSP00000379698.4:p.Arg580=
ENST00000497439.6:n.1910C>A (POMGNT1)
ENST00000684817.1:n.2098C>A (POMGNT1)
ENST00000684898.1:n.2300C>A (POMGNT1)
ENST00000685230.1:c.*1048C>A (POMGNT1) ENSP00000510305.1:n.*1048C>A
ENST00000685275.1:n.2285C>A (POMGNT1)
ENST00000685444.1:c.1639C>A (POMGNT1) ENSP00000510762.1:p.Arg547=
ENST00000685704.1:n.2404C>A (POMGNT1)
ENST00000685833.1:n.4131C>A (POMGNT1)
ENST00000686252.1:n.2812C>A (POMGNT1)
ENST00000686379.1:c.*862C>A (POMGNT1) ENSP00000508913.1:n.*862C>A
ENST00000686724.1:n.3425C>A (POMGNT1)
ENST00000686737.1:c.1738C>A (POMGNT1) ENSP00000508736.1:p.Arg580=
ENST00000687112.1:n.2604C>A (POMGNT1)
ENST00000687149.1:c.1777C>A (POMGNT1) ENSP00000509745.1:p.Arg593=
ENST00000687197.1:c.*678C>A (POMGNT1) ENSP00000510749.1:n.*678C>A
ENST00000687235.1:n.3815C>A (POMGNT1)
ENST00000687613.1:n.2378C>A (POMGNT1)
ENST00000687683.1:c.1738C>A (POMGNT1) ENSP00000508522.1:p.Arg580=
ENST00000688032.1:n.2275C>A (POMGNT1)
ENST00000688596.1:n.2389C>A (POMGNT1)
ENST00000688608.1:c.1639C>A (POMGNT1) ENSP00000508890.1:p.Arg547=
ENST00000689031.1:n.2190C>A (POMGNT1)
ENST00000689756.1:c.*1370C>A (POMGNT1) ENSP00000509023.1:n.*1370C>A
ENST00000690377.1:n.2085C>A (POMGNT1)
ENST00000690678.1:c.1738C>A (POMGNT1) ENSP00000508703.1:p.Arg580=
ENST00000691209.1:c.*678C>A (POMGNT1) ENSP00000510112.1:n.*678C>A
ENST00000691243.1:c.*129C>A (POMGNT1) ENSP00000510654.1:n.*129C>A
ENST00000692202.1:n.2313C>A (POMGNT1)
ENST00000692322.1:c.*1525C>A (POMGNT1) ENSP00000509017.1:n.*1525C>A
ENST00000692369.1:c.1738C>A (POMGNT1) ENSP00000508453.1:p.Arg580=
ENST00000692599.1:n.3613C>A (POMGNT1)
ENST00000692635.1:c.*613C>A (POMGNT1) ENSP00000508425.1:n.*613C>A
ENST00000693168.1:n.3514C>A (POMGNT1)
ENST00000693218.1:c.*299C>A (POMGNT1) ENSP00000510577.1:n.*299C>A
ENST00000693223.1:n.2686C>A (POMGNT1)
ENST00000371984.8:c.1738C>A (POMGNT1) MANE Select ENSP00000361052.3:p.Arg580=
ENST00000371984.7:c.1738C>A (POMGNT1) ENSP00000361052.3:p.Arg580=
ENST00000371992.1:c.1738C>A (POMGNT1) ENSP00000361060.1:p.Arg580=
ENST00000396420.7:c.*1407C>A (POMGNT1) ENSP00000379698.3:n.*1407C>A
ENST00000480972.1:n.387C>A (POMGNT1)
NM_001243766.1:c.1738C>A (POMGNT1) NP_001230695.1:p.Arg580=
NM_001290129.1:c.1672C>A (POMGNT1) NP_001277058.1:p.Arg558=
NM_001290130.1:c.1309C>A (POMGNT1) NP_001277059.1:p.Arg437=
NM_017739.3:c.1738C>A (POMGNT1) NP_060209.3:p.Arg580=
XM_005271010.1:c.1738C>A (POMGNT1) XP_005271067.1:p.Arg580=
XM_006710755.1:c.1738C>A (POMGNT1) XP_006710818.1:p.Arg580=
XM_006710756.1:c.1738C>A (POMGNT1) XP_006710819.1:p.Arg580=
XM_011540460.1:c.678+4593G>T (TSPAN1) XP_011538762.1:n.678+4593G>T
XM_011540461.1:c.633+4593G>T (TSPAN1) XP_011538763.1:n.633+4593G>T
XM_011541759.1:c.1672C>A (POMGNT1) XP_011540061.1:p.Arg558=
XM_011541760.1:c.1672C>A (POMGNT1) XP_011540062.1:p.Arg558=
XM_011541761.1:c.646C>A (POMGNT1) XP_011540063.1:p.Arg216=
XM_011540460.3:c.678+4593G>T (TSPAN1) XP_011538762.1:n.678+4593G>T
XM_011541760.3:c.1672C>A (POMGNT1) XP_011540062.1:p.Arg558=
XM_017001690.1:c.1738C>A (POMGNT1) XP_016857179.1:p.Arg580=
NM_001243766.2:c.1738C>A (POMGNT1) NP_001230695.2:p.Arg580=
NM_001290129.2:c.1672C>A (POMGNT1) NP_001277058.2:p.Arg558=
NM_001290130.2:c.1309C>A (POMGNT1) NP_001277059.2:p.Arg437=
NM_017739.4:c.1738C>A (POMGNT1) MANE Select NP_060209.4:p.Arg580=