Canonical Allele Identifier: CA208497
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 211938
dbSNP Id: rs377292905
gnomAD v2: 1-46658114-G-A
gnomAD v3: 1-46192442-G-A
gnomAD v4: 1-46192442-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46192442G>A , CM000663.2:g.46192442G>A GRCh38
NC_000001.10:g.46658114G>A , CM000663.1:g.46658114G>A GRCh37
NC_000001.9:g.46430701G>A NCBI36
NG_009205.2:g.32864C>T
NG_009205.3:g.32864C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.1285-6C>T (POMGNT1) ENSP00000379698.4:n.1285-6C>T
ENST00000477114.2:n.1847-6C>T (POMGNT1)
ENST00000497439.6:n.1457-6C>T (POMGNT1)
ENST00000684817.1:n.1645-6C>T (POMGNT1)
ENST00000684898.1:n.1847-6C>T (POMGNT1)
ENST00000685230.1:c.*595-6C>T (POMGNT1) ENSP00000510305.1:n.*595-6C>T
ENST00000685275.1:n.1832-6C>T (POMGNT1)
ENST00000685444.1:c.1186-6C>T (POMGNT1) ENSP00000510762.1:n.1186-6C>T
ENST00000685704.1:n.1847-6C>T (POMGNT1)
ENST00000685775.1:n.2812-6C>T (POMGNT1)
ENST00000685833.1:n.2163-6C>T (POMGNT1)
ENST00000686252.1:n.2359-6C>T (POMGNT1)
ENST00000686379.1:c.*409-6C>T (POMGNT1) ENSP00000508913.1:n.*409-6C>T
ENST00000686724.1:n.1457-6C>T (POMGNT1)
ENST00000686737.1:c.1285-6C>T (POMGNT1) ENSP00000508736.1:n.1285-6C>T
ENST00000687112.1:n.2151-6C>T (POMGNT1)
ENST00000687149.1:c.1285-6C>T (POMGNT1) ENSP00000509745.1:n.1285-6C>T
ENST00000687197.1:c.*225-6C>T (POMGNT1) ENSP00000510749.1:n.*225-6C>T
ENST00000687235.1:n.1847-6C>T (POMGNT1)
ENST00000687613.1:n.2035-6C>T (POMGNT1)
ENST00000687683.1:c.1285-6C>T (POMGNT1) ENSP00000508522.1:n.1285-6C>T
ENST00000688032.1:n.1847-6C>T (POMGNT1)
ENST00000688596.1:n.1936-6C>T (POMGNT1)
ENST00000688608.1:c.1186-6C>T (POMGNT1) ENSP00000508890.1:n.1186-6C>T
ENST00000688919.1:n.2481-6C>T (POMGNT1)
ENST00000689031.1:n.1847-6C>T (POMGNT1)
ENST00000689717.1:n.1457-6C>T (POMGNT1)
ENST00000689756.1:c.*917-6C>T (POMGNT1) ENSP00000509023.1:n.*917-6C>T
ENST00000690377.1:n.1632-6C>T (POMGNT1)
ENST00000690678.1:c.1285-6C>T (POMGNT1) ENSP00000508703.1:n.1285-6C>T
ENST00000691209.1:c.*225-6C>T (POMGNT1) ENSP00000510112.1:n.*225-6C>T
ENST00000691243.1:c.1285-6C>T (POMGNT1) ENSP00000510654.1:n.1285-6C>T
ENST00000692169.1:n.1434-6C>T (POMGNT1)
ENST00000692202.1:n.1860-6C>T (POMGNT1)
ENST00000692322.1:c.*1137-6C>T (POMGNT1) ENSP00000509017.1:n.*1137-6C>T
ENST00000692369.1:c.1285-6C>T (POMGNT1) ENSP00000508453.1:n.1285-6C>T
ENST00000692599.1:n.1847-6C>T (POMGNT1)
ENST00000692635.1:c.*225-6C>T (POMGNT1) ENSP00000508425.1:n.*225-6C>T
ENST00000693168.1:n.1546-6C>T (POMGNT1)
ENST00000693218.1:c.1285-6C>T (POMGNT1) ENSP00000510577.1:n.1285-6C>T
ENST00000693223.1:n.2233-6C>T (POMGNT1)
ENST00000693365.1:n.3919-6C>T (POMGNT1)
ENST00000371984.8:c.1285-6C>T (POMGNT1) MANE Select ENSP00000361052.3:n.1285-6C>T
ENST00000371984.7:c.1285-6C>T (POMGNT1) ENSP00000361052.3:n.1285-6C>T
ENST00000371992.1:c.1285-6C>T (POMGNT1) ENSP00000361060.1:n.1285-6C>T
ENST00000396420.7:c.*954-6C>T (POMGNT1) ENSP00000379698.3:n.*954-6C>T
ENST00000485714.1:n.671-6C>T (POMGNT1)
NM_001243766.1:c.1285-6C>T (POMGNT1) NP_001230695.1:n.1285-6C>T
NM_001290129.1:c.1219-6C>T (POMGNT1) NP_001277058.1:n.1219-6C>T
NM_001290130.1:c.856-6C>T (POMGNT1) NP_001277059.1:n.856-6C>T
NM_017739.3:c.1285-6C>T (POMGNT1) NP_060209.3:n.1285-6C>T
XM_005271010.1:c.1285-6C>T (POMGNT1) XP_005271067.1:n.1285-6C>T
XM_006710755.1:c.1285-6C>T (POMGNT1) XP_006710818.1:n.1285-6C>T
XM_006710756.1:c.1285-6C>T (POMGNT1) XP_006710819.1:n.1285-6C>T
XM_011540460.1:c.679-3760G>A (TSPAN1) XP_011538762.1:n.679-3760G>A
XM_011540461.1:c.634-3760G>A (TSPAN1) XP_011538763.1:n.634-3760G>A
XM_011541759.1:c.1219-6C>T (POMGNT1) XP_011540061.1:n.1219-6C>T
XM_011541760.1:c.1219-6C>T (POMGNT1) XP_011540062.1:n.1219-6C>T
XM_011541761.1:c.193-6C>T (POMGNT1) XP_011540063.1:n.193-6C>T
XR_946706.1:n.1445-6C>T (POMGNT1)
XM_011540460.3:c.679-3760G>A (TSPAN1) XP_011538762.1:n.679-3760G>A
XM_011541760.3:c.1219-6C>T (POMGNT1) XP_011540062.1:n.1219-6C>T
XM_017001690.1:c.1285-6C>T (POMGNT1) XP_016857179.1:n.1285-6C>T
NM_001243766.2:c.1285-6C>T (POMGNT1) NP_001230695.2:n.1285-6C>T
NM_001290129.2:c.1219-6C>T (POMGNT1) NP_001277058.2:n.1219-6C>T
NM_001290130.2:c.856-6C>T (POMGNT1) NP_001277059.2:n.856-6C>T
NM_017739.4:c.1285-6C>T (POMGNT1) MANE Select NP_060209.4:n.1285-6C>T