Canonical Allele Identifier: CA129419
Gene: PRICKLE2 HGNC NCBI
PRICKLE2-AS1 HGNC NCBI

Linked Data

ClinVar Variation Id: 30733
dbSNP Id: rs387906989
gnomAD v2: 3-64085449-C-A
gnomAD v3: 3-64099773-C-A
gnomAD v4: 3-64099773-C-A

Genomic Alleles

HGVS Genome Assembly
NC_000003.12:g.64099773C>A , CM000665.2:g.64099773C>A GRCh38
NC_000003.11:g.64085449C>A , CM000665.1:g.64085449C>A GRCh37
NC_000003.10:g.64060489C>A NCBI36
NG_031930.1:g.130683G>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000295902.11:c.1981G>T (PRICKLE2) ENSP00000295902.7:p.Val661Phe
ENST00000564377.6:c.1813G>T (PRICKLE2) ENSP00000455004.2:p.Val605Phe
ENST00000638394.2:c.1813G>T (PRICKLE2) MANE Select ENSP00000492363.1:p.Val605Phe
ENST00000638436.1:n.414G>T (PRICKLE2)
ENST00000640303.1:n.2452G>T (PRICKLE2)
ENST00000295902.10:c.1813G>T (PRICKLE2) ENSP00000295902.6:p.Val605Phe
ENST00000564377.5:c.1981G>T (PRICKLE2) ENSP00000455004.1:p.Val661Phe
NM_198859.3:c.1813G>T (PRICKLE2) NP_942559.1:p.Val605Phe
NR_045697.1:n.3147C>A (PRICKLE2-AS1)
XM_011533432.1:c.2179G>T (PRICKLE2) XP_011531734.1:p.Val727Phe
XM_011533433.1:c.2089G>T (PRICKLE2) XP_011531735.1:p.Val697Phe
XM_011533434.1:c.2071G>T (PRICKLE2) XP_011531736.1:p.Val691Phe
XM_011533435.1:c.1981G>T (PRICKLE2) XP_011531737.1:p.Val661Phe
XM_011533436.1:c.1903G>T (PRICKLE2) XP_011531738.1:p.Val635Phe
XM_011533437.1:c.1903G>T (PRICKLE2) XP_011531739.1:p.Val635Phe
XM_011533438.1:c.1552G>T (PRICKLE2) XP_011531740.1:p.Val518Phe
XM_011533439.1:c.1903G>T (PRICKLE2) XP_011531741.1:p.Val635Phe
XM_011533440.1:c.*69G>T (PRICKLE2) XP_011531742.1:n.*69G>T
XM_011533432.2:c.2179G>T (PRICKLE2) XP_011531734.1:p.Val727Phe
XM_011533433.2:c.2089G>T (PRICKLE2) XP_011531735.1:p.Val697Phe
XM_011533434.2:c.2071G>T (PRICKLE2) XP_011531736.1:p.Val691Phe
XM_011533435.2:c.1981G>T (PRICKLE2) XP_011531737.1:p.Val661Phe
XM_011533436.3:c.1903G>T (PRICKLE2) XP_011531738.1:p.Val635Phe
XM_011533437.2:c.1903G>T (PRICKLE2) XP_011531739.1:p.Val635Phe
XM_011533438.2:c.1552G>T (PRICKLE2) XP_011531740.1:p.Val518Phe
XM_011533440.2:c.*69G>T (PRICKLE2) XP_011531742.1:n.*69G>T
XM_017005798.1:c.1813G>T (PRICKLE2) XP_016861287.1:p.Val605Phe
XM_017005799.1:c.1441G>T (PRICKLE2) XP_016861288.1:p.Val481Phe
NM_198859.4:c.1813G>T (PRICKLE2) MANE Select NP_942559.1:p.Val605Phe
NM_001370528.1:c.1813G>T (PRICKLE2) NP_001357457.1:p.Val605Phe