Canonical Allele Identifier: CA073029

Gene: MSH6

Linked Data

• ClinVar Variation Id: 385317
• ClinVar RCV Id: RCV000424429 ; RCV000986695
• dbSNP Id: rs748339592
• ExAC: 2:48010327 T / G
• gnomAD v2: 2-48010327-T-G
• gnomAD v4: 2-47783188-T-G
• MyVariant Identifiers: chr2:g.48010327T>G (hg19) ; chr2:g.47783188T>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47783188T>G , CM000664.2:g.47783188T>G	GRCh38
NC_000002.11:g.48010327T>G , CM000664.1:g.48010327T>G	GRCh37
NC_000002.10:g.47863831T>G	NCBI36
NG_007111.1:g.5042T>G , LRG_219:g.5042T>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000700004.2:c.-46T>G	ENSP00000514752.2:n.-46T>G
ENST00000699999.1:n.39T>G
ENST00000700000.1:c.-46T>G	ENSP00000514749.1:n.-46T>G
ENST00000700001.1:n.27T>G
ENST00000700002.1:c.-46T>G	ENSP00000514750.1:n.-46T>G
ENST00000234420.11:c.-46T>G MANE Select	ENSP00000234420.5:n.-46T>G
ENST00000540021.6:c.-46T>G	ENSP00000446475.1:n.-46T>G
ENST00000652107.1:c.-37-7739T>G	ENSP00000498629.1:n.-37-7739T>G
ENST00000673637.1:c.-81T>G	ENSP00000501310.1:n.-81T>G
ENST00000673922.1:n.44T>G
ENST00000234420.9:c.-46T>G	ENSP00000234420.4:n.-46T>G
ENST00000445503.5:c.-46T>G	ENSP00000405294.1:n.-46T>G
ENST00000456246.1:c.-46T>G	ENSP00000410570.1:n.-46T>G
ENST00000493177.1:n.19T>G
ENST00000540021.5:c.-46T>G	ENSP00000446475.1:n.-46T>G
ENST00000606499.1:c.-37-7739T>G	ENSP00000475605.1:n.-37-7739T>G
ENST00000614496.4:c.-782T>G	ENSP00000477844.1:n.-782T>G
ENST00000616033.4:c.-46T>G	ENSP00000480261.1:n.-46T>G
ENST00000622629.4:c.-3142T>G	ENSP00000482078.1:n.-3142T>G
NM_000179.2:c.-46T>G , LRG_219t1:c.-46T>G	NP_000170.1:n.-46T>G
NM_001281492.1:c.-46T>G	NP_001268421.1:n.-46T>G
NM_001281493.1:c.-782T>G	NP_001268422.1:n.-782T>G
XM_011532800.1:c.-81T>G	XP_011531102.1:n.-81T>G
XM_024452819.1:c.-46T>G	XP_024308587.1:n.-46T>G
XM_024452822.1:c.-782T>G	XP_024308590.1:n.-782T>G
NM_000179.3:c.-46T>G MANE Select	NP_000170.1:n.-46T>G
NM_001281492.2:c.-46T>G	NP_001268421.1:n.-46T>G
NM_001281493.2:c.-782T>G	NP_001268422.1:n.-782T>G