Canonical Allele Identifier: CA072783

Linked Data

ClinVar Variation Id: 1487610
dbSNP Id: rs771181616
gnomAD v2: 2-48033922-G-A
gnomAD v3: 2-47806783-G-A
gnomAD v4: 2-47806783-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47806783G>A , CM000664.2:g.47806783G>A GRCh38
NC_000002.11:g.48033922G>A , CM000664.1:g.48033922G>A GRCh37
NC_000002.10:g.47887426G>A NCBI36
NG_007111.1:g.28637G>A , LRG_219:g.28637G>A
NG_008397.1:g.103893C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000411819.2:c.3709G>A (MSH6) ENSP00000406248.2:p.Val1237Ile
ENST00000420813.6:c.3709G>A (MSH6) ENSP00000390382.2:p.Val1237Ile
ENST00000455383.6:c.3709G>A (MSH6) ENSP00000397484.2:p.Val1237Ile
ENST00000700004.2:c.3622G>A (MSH6) ENSP00000514752.2:p.Val1208Ile
ENST00000699999.1:n.4680G>A (MSH6)
ENST00000700000.1:c.2440G>A (MSH6) ENSP00000514749.1:p.Val814Ile
ENST00000700002.1:c.4012G>A (MSH6) ENSP00000514750.1:p.Val1338Ile
ENST00000700003.1:c.1461G>A (MSH6) ENSP00000514751.1:n.1461G>A
ENST00000700004.1:c.2779G>A (MSH6) ENSP00000514752.1:p.Val927Ile
ENST00000700005.1:n.2984G>A (MSH6)
ENST00000700007.1:n.2601G>A (MSH6)
ENST00000700008.1:n.2268G>A (MSH6)
ENST00000700009.1:n.2670G>A (MSH6)
ENST00000700010.1:n.1415G>A (MSH6)
ENST00000700011.1:n.3300G>A (MSH6)
ENST00000682451.1:n.3965C>T (FBXO11)
ENST00000684712.1:n.4227C>T (FBXO11)
ENST00000234420.11:c.4006G>A (MSH6) MANE Select ENSP00000234420.5:p.Val1336Ile
ENST00000540021.6:c.3616G>A (MSH6) ENSP00000446475.1:p.Val1206Ile
ENST00000652107.1:c.3709G>A (MSH6) ENSP00000498629.1:p.Val1237Ile
ENST00000673637.1:c.3709G>A (MSH6) ENSP00000501310.1:p.Val1237Ile
ENST00000234420.9:c.4006G>A (MSH6) ENSP00000234420.4:p.Val1336Ile
ENST00000405808.5:c.169+1412C>T (FBXO11) ENSP00000385127.1:n.169+1412C>T
ENST00000434234.5:c.*124+1211C>T (FBXO11) ENSP00000402692.1:n.*124+1211C>T
ENST00000445503.5:c.*3353G>A (MSH6) ENSP00000405294.1:n.*3353G>A
ENST00000465204.5:n.3127C>T (FBXO11)
ENST00000538136.1:c.3100G>A (MSH6) ENSP00000438580.1:p.Val1034Ile
ENST00000540021.5:c.3616G>A (MSH6) ENSP00000446475.1:p.Val1206Ile
ENST00000614496.4:c.3100G>A (MSH6) ENSP00000477844.1:p.Val1034Ile
ENST00000622629.4:c.907G>A (MSH6) ENSP00000482078.1:p.Val303Ile
NM_000179.2:c.4006G>A , LRG_219t1:c.4006G>A (MSH6) NP_000170.1:p.Val1336Ile
NM_001281492.1:c.3616G>A (MSH6) NP_001268421.1:p.Val1206Ile
NM_001281493.1:c.3100G>A (MSH6) NP_001268422.1:p.Val1034Ile
NM_001281494.1:c.3100G>A (MSH6) NP_001268423.1:p.Val1034Ile
XM_005264271.1:c.3709G>A (MSH6) XP_005264328.1:p.Val1237Ile
XM_011532798.1:c.3823G>A (MSH6) XP_011531100.1:p.Val1275Ile
XM_011532799.1:c.3709G>A (MSH6) XP_011531101.1:p.Val1237Ile
XM_011532800.1:c.3709G>A (MSH6) XP_011531102.1:p.Val1237Ile
XM_024452819.1:c.4099G>A (MSH6) XP_024308587.1:p.Val1367Ile
XM_024452820.1:c.3916G>A (MSH6) XP_024308588.1:p.Val1306Ile
XM_024452821.1:c.3802G>A (MSH6) XP_024308589.1:p.Val1268Ile
XM_024452822.1:c.3193G>A (MSH6) XP_024308590.1:p.Val1065Ile
NM_000179.3:c.4006G>A (MSH6) MANE Select NP_000170.1:p.Val1336Ile
NM_001281492.2:c.3616G>A (MSH6) NP_001268421.1:p.Val1206Ile
NM_001281493.2:c.3100G>A (MSH6) NP_001268422.1:p.Val1034Ile
NM_001281494.2:c.3100G>A (MSH6) NP_001268423.1:p.Val1034Ile