Canonical Allele Identifier: CA008096

Gene: MLH1

Linked Data

• ClinVar Variation Id: 89991
• ClinVar RCV Id: RCV000075473 ; RCV000627203 ; RCV002415529 ; RCV002514344
• dbSNP Id: rs63750639
• MyVariant Identifiers: chr3:g.37090403G>A (hg19) ; chr3:g.37048912G>A (hg38)
• PubMed: PMID:12095971 ; PMID:28874130

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.37048912G>A , CM000665.2:g.37048912G>A	GRCh38
NC_000003.11:g.37090403G>A , CM000665.1:g.37090403G>A	GRCh37
NC_000003.10:g.37065407G>A	NCBI36
NG_007109.2:g.60563G>A , LRG_216:g.60563G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000413740.2:c.1668-1574G>A	ENSP00000416476.2:n.1668-1574G>A
ENST00000429117.6:c.1704G>A	ENSP00000407019.2:p.Trp568Ter
ENST00000450420.6:c.1559-1574G>A	ENSP00000393006.2:n.1559-1574G>A
ENST00000456676.7:c.1896+1229G>A	ENSP00000416687.3:n.1896+1229G>A
ENST00000492474.6:c.1275G>A	ENSP00000518393.1:p.Trp425Ter
ENST00000616768.6:c.1905G>A	ENSP00000480669.3:p.Trp635Ter
ENST00000673673.2:c.1833G>A	ENSP00000500979.2:p.Trp611Ter
ENST00000231790.8:c.1998G>A MANE Select	ENSP00000231790.3:p.Trp666Ter
ENST00000413212.2:c.*916G>A	ENSP00000400844.2:n.*916G>A
ENST00000432299.6:c.*1830G>A	ENSP00000416783.1:n.*1830G>A
ENST00000447829.6:c.*1109G>A	ENSP00000399329.2:n.*1109G>A
ENST00000539477.6:c.1275G>A	ENSP00000443665.1:p.Trp425Ter
ENST00000616768.5:c.942G>A	ENSP00000480669.2:p.Trp314Ter
ENST00000673673.1:c.1786G>A
ENST00000673741.1:n.1032G>A
ENST00000673889.1:n.1380G>A
ENST00000673897.1:c.*1790G>A	ENSP00000501109.1:n.*1790G>A
ENST00000673899.1:c.1266G>A	ENSP00000501030.1:p.Trp422Ter
ENST00000673947.1:c.*2138G>A	ENSP00000501304.1:n.*2138G>A
ENST00000673972.1:c.*1876G>A	ENSP00000501281.1:n.*1876G>A
ENST00000674019.1:c.1275G>A	ENSP00000501081.1:p.Trp425Ter
ENST00000674111.1:c.*227G>A	ENSP00000501162.1:n.*227G>A
ENST00000674125.1:n.709G>A
ENST00000231790.6:c.1998G>A	ENSP00000231790.2:p.Trp666Ter
ENST00000413740.1:c.291-1574G>A	ENSP00000416476.1:n.291-1574G>A
ENST00000435176.5:c.1704G>A	ENSP00000402564.1:p.Trp568Ter
ENST00000450420.5:c.182-1574G>A	ENSP00000393006.1:n.182-1574G>A
ENST00000455445.6:c.1275G>A	ENSP00000398272.2:p.Trp425Ter
ENST00000456676.6:c.1871+1229G>A
ENST00000458205.6:c.1275G>A	ENSP00000402667.2:p.Trp425Ter
ENST00000536378.5:c.1275G>A	ENSP00000444286.2:p.Trp425Ter
ENST00000539477.5:c.1275G>A	ENSP00000443665.1:p.Trp425Ter
NM_000249.3:c.1998G>A , LRG_216t1:c.1998G>A	NP_000240.1:p.Trp666Ter
NM_001167617.1:c.1704G>A	NP_001161089.1:p.Trp568Ter
NM_001167618.1:c.1275G>A	NP_001161090.1:p.Trp425Ter
NM_001167619.1:c.1275G>A	NP_001161091.1:p.Trp425Ter
NM_001258271.1:c.1896+1229G>A	NP_001245200.1:n.1896+1229G>A
NM_001258273.1:c.1275G>A	NP_001245202.1:p.Trp425Ter
NM_001258274.1:c.1275G>A	NP_001245203.1:p.Trp425Ter
XM_005265161.1:c.1791G>A	XP_005265218.1:p.Trp597Ter
XM_005265163.1:c.1275G>A	XP_005265220.1:p.Trp425Ter
XM_005265164.1:c.1275G>A	XP_005265221.1:p.Trp425Ter
XM_005265166.1:c.975G>A	XP_005265223.1:p.Trp325Ter
XM_011533727.1:c.924G>A	XP_011532029.1:p.Trp308Ter
NM_001167617.2:c.1704G>A	NP_001161089.1:p.Trp568Ter
NM_001167618.2:c.1275G>A	NP_001161090.1:p.Trp425Ter
NM_001167619.2:c.1275G>A	NP_001161091.1:p.Trp425Ter
NM_001258274.2:c.1275G>A	NP_001245203.1:p.Trp425Ter
NM_001354615.1:c.1275G>A	NP_001341544.1:p.Trp425Ter
NM_001354616.1:c.1275G>A	NP_001341545.1:p.Trp425Ter
NM_001354617.1:c.1275G>A	NP_001341546.1:p.Trp425Ter
NM_001354618.1:c.1275G>A	NP_001341547.1:p.Trp425Ter
NM_001354619.1:c.1275G>A	NP_001341548.1:p.Trp425Ter
NM_001354620.1:c.1704G>A	NP_001341549.1:p.Trp568Ter
NM_001354621.1:c.975G>A	NP_001341550.1:p.Trp325Ter
NM_001354622.1:c.975G>A	NP_001341551.1:p.Trp325Ter
NM_001354623.1:c.975G>A	NP_001341552.1:p.Trp325Ter
NM_001354624.1:c.924G>A	NP_001341553.1:p.Trp308Ter
NM_001354625.1:c.924G>A	NP_001341554.1:p.Trp308Ter
NM_001354626.1:c.924G>A	NP_001341555.1:p.Trp308Ter
NM_001354627.1:c.924G>A	NP_001341556.1:p.Trp308Ter
NM_001354628.1:c.1905G>A	NP_001341557.1:p.Trp635Ter
NM_001354629.1:c.1899G>A	NP_001341558.1:p.Trp633Ter
NM_001354630.1:c.1833G>A	NP_001341559.1:p.Trp611Ter
XM_005265161.2:c.1791G>A	XP_005265218.1:p.Trp597Ter
XM_017006450.2:c.975G>A	XP_016861939.1:p.Trp325Ter
NM_000249.4:c.1998G>A MANE Select	NP_000240.1:p.Trp666Ter
NM_001167617.3:c.1704G>A	NP_001161089.1:p.Trp568Ter
NM_001167618.3:c.1275G>A	NP_001161090.1:p.Trp425Ter
NM_001167619.3:c.1275G>A	NP_001161091.1:p.Trp425Ter
NM_001258271.2:c.1896+1229G>A	NP_001245200.1:n.1896+1229G>A
NM_001258273.2:c.1275G>A	NP_001245202.1:p.Trp425Ter
NM_001258274.3:c.1275G>A	NP_001245203.1:p.Trp425Ter
NM_001354615.2:c.1275G>A	NP_001341544.1:p.Trp425Ter
NM_001354616.2:c.1275G>A	NP_001341545.1:p.Trp425Ter
NM_001354617.2:c.1275G>A	NP_001341546.1:p.Trp425Ter
NM_001354618.2:c.1275G>A	NP_001341547.1:p.Trp425Ter
NM_001354619.2:c.1275G>A	NP_001341548.1:p.Trp425Ter
NM_001354620.2:c.1704G>A	NP_001341549.1:p.Trp568Ter
NM_001354621.2:c.975G>A	NP_001341550.1:p.Trp325Ter
NM_001354622.2:c.975G>A	NP_001341551.1:p.Trp325Ter
NM_001354623.2:c.975G>A	NP_001341552.1:p.Trp325Ter
NM_001354624.2:c.924G>A	NP_001341553.1:p.Trp308Ter
NM_001354625.2:c.924G>A	NP_001341554.1:p.Trp308Ter
NM_001354626.2:c.924G>A	NP_001341555.1:p.Trp308Ter
NM_001354627.2:c.924G>A	NP_001341556.1:p.Trp308Ter
NM_001354628.2:c.1905G>A	NP_001341557.1:p.Trp635Ter
NM_001354629.2:c.1899G>A	NP_001341558.1:p.Trp633Ter
NM_001354630.2:c.1833G>A	NP_001341559.1:p.Trp611Ter