Bcftools htslib install notes

  • https://samtools.github.io/bcftools/
  • mkdir -p /usr/local/brl/local/home/third_party_software
  • cd /usr/local/brl/local/home/third_party_software
  • git clone git://github.com/samtools/htslib.git
  • git clone git://github.com/samtools/bcftools.git
  • cd bcftools
  • scl enable devtoolset-2 bash
    • #required if you need to enable devtoolset-2, which may or may not be required for your specific OS and version
  • make