Canonical Allele Identifier: CA553479
Gene: NPHP4 HGNC NCBI

Linked Data

ClinVar Variation Id: 297788
dbSNP Id: rs560944258
gnomAD v2: 1-5925220-C-T
gnomAD v3: 1-5865160-C-T
gnomAD v4: 1-5865160-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.5865160C>T , CM000663.2:g.5865160C>T GRCh38
NC_000001.10:g.5925220C>T , CM000663.1:g.5925220C>T GRCh37
NC_000001.9:g.5847807C>T NCBI36
NG_011724.2:g.132312G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000378156.9:c.3758G>A MANE Select ENSP00000367398.4:p.Arg1253Gln
ENST00000378156.8:c.3758G>A ENSP00000367398.4:p.Arg1253Gln
ENST00000378161.5:n.2021G>A
ENST00000378169.7:c.*2659G>A ENSP00000367411.3:n.*2659G>A
ENST00000460696.1:n.1922G>A
ENST00000478423.6:n.3490G>A
ENST00000489180.6:c.*1569G>A ENSP00000423747.1:n.*1569G>A
NM_001291593.1:c.2219G>A NP_001278522.1:p.Arg740Gln
NM_001291594.1:c.2222G>A NP_001278523.1:p.Arg741Gln
NM_015102.4:c.3758G>A NP_055917.1:p.Arg1253Gln
NR_111987.1:n.4573G>A
XM_006710563.2:c.3758G>A XP_006710626.1:p.Arg1253Gln
XM_006710565.2:c.3758G>A XP_006710628.1:p.Arg1253Gln
XM_011541213.1:c.3755G>A XP_011539515.1:p.Arg1252Gln
XM_011541214.1:c.3716G>A XP_011539516.1:p.Arg1239Gln
XM_011541215.1:c.3647G>A XP_011539517.1:p.Arg1216Gln
XM_011541216.1:c.3758G>A XP_011539518.1:p.Arg1253Gln
XM_011541217.1:c.3758G>A XP_011539519.1:p.Arg1253Gln
XM_011541218.1:c.3758G>A XP_011539520.1:p.Arg1253Gln
XM_011541219.1:c.3704G>A XP_011539521.1:p.Arg1235Gln
XM_011541220.1:c.3645-643G>A XP_011539522.1:n.3645-643G>A
XM_006710563.3:c.3758G>A XP_006710626.1:p.Arg1253Gln
XM_011541216.2:c.3758G>A XP_011539518.1:p.Arg1253Gln
XM_011541217.2:c.3758G>A XP_011539519.1:p.Arg1253Gln
XM_011541218.2:c.3758G>A XP_011539520.1:p.Arg1253Gln
XM_017000996.1:c.3713G>A XP_016856485.1:p.Arg1238Gln
XM_017000997.1:c.3758G>A XP_016856486.1:p.Arg1253Gln
XM_017000998.1:c.3645-50G>A XP_016856487.1:n.3645-50G>A
XM_017000999.1:c.3230G>A XP_016856488.1:p.Arg1077Gln
XM_017001000.2:c.3230G>A XP_016856489.1:p.Arg1077Gln
XM_017001001.1:c.2960G>A XP_016856490.1:p.Arg987Gln
XM_017001003.1:c.2219G>A XP_016856492.1:p.Arg740Gln
XR_001737114.1:n.3683-643G>A
XR_001737115.1:n.3609G>A
NM_015102.5:c.3758G>A MANE Select NP_055917.1:p.Arg1253Gln
NM_001291593.2:c.2219G>A NP_001278522.1:p.Arg740Gln
NM_001291594.2:c.2222G>A NP_001278523.1:p.Arg741Gln
NR_111987.2:n.4525G>A