Canonical Allele Identifier: CA5296301
Gene: SETX HGNC NCBI

Linked Data

ClinVar Variation Id: 468527
dbSNP Id: rs141589525

Genomic Alleles

HGVS Genome Assembly
NC_000009.12:g.132264403C>A , CM000671.2:g.132264403C>A GRCh38
NC_000009.11:g.135139790C>A , CM000671.1:g.135139790C>A GRCh37
NC_000009.10:g.134129611C>A NCBI36
NG_007946.1:g.95583G>T , LRG_268:g.95583G>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000224140.6:c.7870G>T MANE Select ENSP00000224140.5:p.Asp2624Tyr
ENST00000224140.5:c.7870G>T ENSP00000224140.5:p.Asp2624Tyr
ENST00000436441.5:c.2683G>T ENSP00000409143.1:p.Asp895Tyr
ENST00000477049.1:n.1020G>T
NM_015046.5:c.7870G>T , LRG_268t1:c.7870G>T NP_055861.3:p.Asp2624Tyr
XM_005272171.1:c.7957G>T XP_005272228.1:p.Asp2653Tyr
XM_005272172.1:c.7957G>T XP_005272229.1:p.Asp2653Tyr
XM_005272173.1:c.7957G>T XP_005272230.1:p.Asp2653Tyr
XM_011518404.1:c.7957G>T XP_011516706.1:p.Asp2653Tyr
XM_011518405.1:c.7957G>T XP_011516707.1:p.Asp2653Tyr
XR_929739.1:n.7786G>T
NM_001351527.1:c.7870G>T NP_001338456.1:p.Asp2624Tyr
NM_001351528.1:c.7957G>T NP_001338457.1:p.Asp2653Tyr
NM_015046.6:c.7870G>T NP_055861.3:p.Asp2624Tyr
XM_005272172.3:c.7957G>T XP_005272229.1:p.Asp2653Tyr
XM_005272173.3:c.7957G>T XP_005272230.1:p.Asp2653Tyr
XM_011518404.3:c.7957G>T XP_011516706.1:p.Asp2653Tyr
XM_011518405.3:c.7957G>T XP_011516707.1:p.Asp2653Tyr
XM_017014496.1:c.2410G>T XP_016869985.1:p.Asp804Tyr
XR_001746251.1:n.7425G>T
XR_929739.2:n.7786G>T
NM_015046.7:c.7870G>T MANE Select NP_055861.3:p.Asp2624Tyr
NM_001351528.2:c.7957G>T NP_001338457.1:p.Asp2653Tyr
NM_001351527.2:c.7870G>T NP_001338456.1:p.Asp2624Tyr