Canonical Allele Identifier: CA366743574

Gene: PMS2

Linked Data

• ClinVar Variation Id: 1761978
• ClinVar RCV Id: RCV002419463
• MyVariant Identifiers: chr7:g.6035259G>T (hg19) ; chr7:g.5995628G>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5995628G>T , CM000669.2:g.5995628G>T	GRCh38
NC_000007.13:g.6035259G>T , CM000669.1:g.6035259G>T	GRCh37
NC_000007.12:g.6001785G>T	NCBI36
NG_008466.1:g.18479C>A , LRG_161:g.18479C>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000699814.2:c.*299+3480C>A	ENSP00000514615.2:n.*299+3480C>A
ENST00000699840.2:c.806C>A	ENSP00000514638.2:p.Ser269Ter
ENST00000699930.2:c.701C>A	ENSP00000514695.2:p.Ser234Ter
ENST00000406569.8:c.809C>A	ENSP00000514464.1:p.Ser270Ter
ENST00000644110.2:c.*403C>A	ENSP00000496392.2:n.*403C>A
ENST00000699752.1:c.809C>A	ENSP00000514561.1:p.Ser270Ter
ENST00000699753.1:c.*202+1698C>A	ENSP00000514562.1:n.*202+1698C>A
ENST00000699754.1:c.705+3480C>A	ENSP00000514563.1:n.705+3480C>A
ENST00000699755.1:c.*208C>A	ENSP00000514564.1:n.*208C>A
ENST00000699756.1:c.*396C>A	ENSP00000514565.1:n.*396C>A
ENST00000699757.1:c.*66C>A	ENSP00000514566.1:n.*66C>A
ENST00000699758.1:c.*66C>A	ENSP00000514567.1:n.*66C>A
ENST00000699759.1:n.881C>A
ENST00000699760.1:c.491C>A	ENSP00000514568.1:p.Ser164Ter
ENST00000699761.1:c.404C>A	ENSP00000514569.1:p.Ser135Ter
ENST00000699762.1:c.236C>A	ENSP00000514570.1:p.Ser79Ter
ENST00000699763.1:c.404C>A	ENSP00000514571.1:p.Ser135Ter
ENST00000699764.1:c.809C>A	ENSP00000514572.1:p.Ser270Ter
ENST00000699765.1:c.485+1698C>A	ENSP00000514573.1:n.485+1698C>A
ENST00000699766.1:c.809C>A	ENSP00000514574.1:p.Ser270Ter
ENST00000699767.1:c.809C>A	ENSP00000514575.1:p.Ser270Ter
ENST00000699768.1:c.809C>A	ENSP00000514576.1:p.Ser270Ter
ENST00000699811.1:c.404C>A	ENSP00000514614.1:p.Ser135Ter
ENST00000699813.1:n.922C>A
ENST00000699814.1:c.526+3480C>A
ENST00000699815.1:c.*305-1024C>A	ENSP00000514616.1:n.*305-1024C>A
ENST00000699816.1:c.404C>A	ENSP00000514617.1:p.Ser135Ter
ENST00000699817.1:c.*403C>A	ENSP00000514618.1:n.*403C>A
ENST00000699818.1:c.404C>A	ENSP00000514619.1:p.Ser135Ter
ENST00000699819.1:c.*60+1698C>A	ENSP00000514620.1:n.*60+1698C>A
ENST00000699820.1:c.809C>A	ENSP00000514621.1:p.Ser270Ter
ENST00000699821.1:c.404C>A	ENSP00000514622.1:p.Ser135Ter
ENST00000699822.1:c.*261C>A	ENSP00000514623.1:n.*261C>A
ENST00000699823.1:c.404C>A	ENSP00000514624.1:p.Ser135Ter
ENST00000699824.1:c.*312C>A	ENSP00000514625.1:n.*312C>A
ENST00000699825.1:c.404C>A	ENSP00000514626.1:p.Ser135Ter
ENST00000699826.1:c.*208C>A	ENSP00000514627.1:n.*208C>A
ENST00000699827.1:c.641C>A	ENSP00000514628.1:p.Ser214Ter
ENST00000699828.1:c.809C>A	ENSP00000514629.1:p.Ser270Ter
ENST00000699829.1:c.*310C>A	ENSP00000514630.1:n.*310C>A
ENST00000699830.1:c.*208C>A	ENSP00000514631.1:n.*208C>A
ENST00000699833.1:n.2581C>A
ENST00000699837.1:c.404C>A	ENSP00000514635.1:p.Ser135Ter
ENST00000699838.1:c.*709C>A	ENSP00000514636.1:n.*709C>A
ENST00000699839.1:c.995C>A	ENSP00000514637.1:p.Ser332Ter
ENST00000699840.1:c.806C>A	ENSP00000514638.1:p.Ser269Ter
ENST00000699916.1:c.*66C>A	ENSP00000514684.1:n.*66C>A
ENST00000699917.1:c.*258C>A	ENSP00000514685.1:n.*258C>A
ENST00000699918.1:c.*310C>A	ENSP00000514686.1:n.*310C>A
ENST00000699919.1:c.*396C>A	ENSP00000514687.1:n.*396C>A
ENST00000699920.1:c.*445C>A	ENSP00000514688.1:n.*445C>A
ENST00000699928.1:c.809C>A	ENSP00000514693.1:p.Ser270Ter
ENST00000699929.1:c.*110C>A	ENSP00000514694.1:n.*110C>A
ENST00000699930.1:c.701C>A	ENSP00000514695.1:p.Ser234Ter
ENST00000699931.1:n.920C>A
ENST00000699932.1:c.803+1698C>A	ENSP00000514696.1:n.803+1698C>A
ENST00000699933.1:n.883+1698C>A
ENST00000699951.1:c.803+1698C>A	ENSP00000514706.1:n.803+1698C>A
ENST00000699952.1:c.803+1698C>A	ENSP00000514707.1:n.803+1698C>A
ENST00000699953.1:c.711C>A	ENSP00000514708.1:p.Leu237=
ENST00000699954.1:c.*110C>A	ENSP00000514709.1:n.*110C>A
ENST00000265849.12:c.809C>A MANE Select	ENSP00000265849.7:p.Ser270Ter
ENST00000642292.1:c.404C>A	ENSP00000495524.1:p.Ser135Ter
ENST00000642456.1:c.404C>A	ENSP00000493814.1:p.Ser135Ter
ENST00000643595.1:c.*208C>A	ENSP00000494497.1:n.*208C>A
ENST00000644110.1:c.491C>A	ENSP00000496392.1:p.Ser164Ter
ENST00000265849.11:c.809C>A	ENSP00000265849.7:p.Ser270Ter
ENST00000382321.5:c.803+1698C>A	ENSP00000371758.4:n.803+1698C>A
ENST00000406569.7:n.809C>A
ENST00000441476.6:c.491C>A	ENSP00000392843.2:p.Ser164Ter
ENST00000469652.1:n.62+10365C>A
NM_000535.5:c.809C>A , LRG_161t1:c.809C>A	NP_000526.1:p.Ser270Ter
NR_003085.2:n.891C>A
XM_006715742.2:c.803C>A	XP_006715805.1:p.Ser268Ter
XM_011515427.1:c.854C>A	XP_011513729.1:p.Ser285Ter
XM_011515428.1:c.854C>A	XP_011513730.1:p.Ser285Ter
XM_011515429.1:c.491C>A	XP_011513731.1:p.Ser164Ter
XM_011515430.1:c.491C>A	XP_011513732.1:p.Ser164Ter
NM_000535.6:c.809C>A	NP_000526.2:p.Ser270Ter
NM_001322003.1:c.404C>A	NP_001308932.1:p.Ser135Ter
NM_001322004.1:c.404C>A	NP_001308933.1:p.Ser135Ter
NM_001322005.1:c.404C>A	NP_001308934.1:p.Ser135Ter
NM_001322006.1:c.809C>A	NP_001308935.1:p.Ser270Ter
NM_001322007.1:c.491C>A	NP_001308936.1:p.Ser164Ter
NM_001322008.1:c.491C>A	NP_001308937.1:p.Ser164Ter
NM_001322009.1:c.404C>A	NP_001308938.1:p.Ser135Ter
NM_001322010.1:c.404C>A	NP_001308939.1:p.Ser135Ter
NM_001322011.1:c.-125C>A	NP_001308940.1:n.-125C>A
NM_001322012.1:c.-125C>A	NP_001308941.1:n.-125C>A
NM_001322013.1:c.236C>A	NP_001308942.1:p.Ser79Ter
NM_001322014.1:c.809C>A	NP_001308943.1:p.Ser270Ter
NM_001322015.1:c.500C>A	NP_001308944.1:p.Ser167Ter
NR_136154.1:n.896C>A
XM_017012342.2:c.-31+1698C>A	XP_016867831.1:n.-31+1698C>A
XM_024446800.1:c.404C>A	XP_024302568.1:p.Ser135Ter
NM_000535.7:c.809C>A MANE Select	NP_000526.2:p.Ser270Ter
NM_001322003.2:c.404C>A	NP_001308932.1:p.Ser135Ter
NM_001322004.2:c.404C>A	NP_001308933.1:p.Ser135Ter
NM_001322005.2:c.404C>A	NP_001308934.1:p.Ser135Ter
NM_001322006.2:c.809C>A	NP_001308935.1:p.Ser270Ter
NM_001322008.2:c.491C>A	NP_001308937.1:p.Ser164Ter
NM_001322009.2:c.404C>A	NP_001308938.1:p.Ser135Ter
NM_001322010.2:c.404C>A	NP_001308939.1:p.Ser135Ter
NM_001322011.2:c.-125C>A	NP_001308940.1:n.-125C>A
NM_001322012.2:c.-125C>A	NP_001308941.1:n.-125C>A
NM_001322013.2:c.236C>A	NP_001308942.1:p.Ser79Ter
NM_001322014.2:c.809C>A	NP_001308943.1:p.Ser270Ter
NM_001322015.2:c.500C>A	NP_001308944.1:p.Ser167Ter
NM_001322007.2:c.491C>A	NP_001308936.1:p.Ser164Ter