Canonical Allele Identifier: CA366738146

Gene: PMS2

Linked Data

• ClinVar Variation Id: 480341
• ClinVar RCV Id: RCV000570562
• dbSNP Id: rs1554295953
• MyVariant Identifiers: chr7:g.6022599T>G (hg19) ; chr7:g.5982968T>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5982968T>G , CM000669.2:g.5982968T>G	GRCh38
NC_000007.13:g.6022599T>G , CM000669.1:g.6022599T>G	GRCh37
NC_000007.12:g.5989125T>G	NCBI36
NG_008466.1:g.31139A>C , LRG_161:g.31139A>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000699814.2:c.*1426A>C	ENSP00000514615.2:n.*1426A>C
ENST00000699840.2:c.2027A>C	ENSP00000514638.2:p.Glu676Ala
ENST00000699930.2:c.1922A>C	ENSP00000514695.2:p.Glu641Ala
ENST00000406569.8:c.1678+4119A>C	ENSP00000514464.1:n.1678+4119A>C
ENST00000644110.2:c.*1624A>C	ENSP00000496392.2:n.*1624A>C
ENST00000699752.1:c.1874A>C	ENSP00000514561.1:p.Glu625Ala
ENST00000699753.1:c.*1451A>C	ENSP00000514562.1:n.*1451A>C
ENST00000699754.1:c.1832A>C	ENSP00000514563.1:p.Glu611Ala
ENST00000699755.1:c.*1429A>C	ENSP00000514564.1:n.*1429A>C
ENST00000699756.1:c.*1617A>C	ENSP00000514565.1:n.*1617A>C
ENST00000699757.1:c.*1287A>C	ENSP00000514566.1:n.*1287A>C
ENST00000699758.1:c.*1287A>C	ENSP00000514567.1:n.*1287A>C
ENST00000699759.1:n.2884A>C
ENST00000699760.1:c.1712A>C	ENSP00000514568.1:p.Glu571Ala
ENST00000699761.1:c.1625A>C	ENSP00000514569.1:p.Glu542Ala
ENST00000699762.1:c.1457A>C	ENSP00000514570.1:p.Glu486Ala
ENST00000699763.1:c.*1120A>C	ENSP00000514571.1:n.*1120A>C
ENST00000699764.1:c.*348A>C	ENSP00000514572.1:n.*348A>C
ENST00000699765.1:c.*1126A>C	ENSP00000514573.1:n.*1126A>C
ENST00000699766.1:c.2030A>C	ENSP00000514574.1:p.Glu677Ala
ENST00000699767.1:c.2030A>C	ENSP00000514575.1:p.Glu677Ala
ENST00000699768.1:c.2030A>C	ENSP00000514576.1:p.Glu677Ala
ENST00000699811.1:c.1625A>C	ENSP00000514614.1:p.Glu542Ala
ENST00000699813.1:n.2143A>C
ENST00000699814.1:c.1653A>C
ENST00000699815.1:c.*1561A>C	ENSP00000514616.1:n.*1561A>C
ENST00000699816.1:c.*920A>C	ENSP00000514617.1:n.*920A>C
ENST00000699817.1:c.*1624A>C	ENSP00000514618.1:n.*1624A>C
ENST00000699818.1:c.1625A>C	ENSP00000514619.1:p.Glu542Ala
ENST00000699819.1:c.*1187A>C	ENSP00000514620.1:n.*1187A>C
ENST00000699820.1:c.1168A>C	ENSP00000514621.1:p.Lys390Gln
ENST00000699821.1:c.1625A>C	ENSP00000514622.1:p.Glu542Ala
ENST00000699822.1:c.*1482A>C	ENSP00000514623.1:n.*1482A>C
ENST00000699823.1:c.1625A>C	ENSP00000514624.1:p.Glu542Ala
ENST00000699824.1:c.*1533A>C	ENSP00000514625.1:n.*1533A>C
ENST00000699825.1:c.1469A>C	ENSP00000514626.1:p.Glu490Ala
ENST00000699826.1:c.*1429A>C	ENSP00000514627.1:n.*1429A>C
ENST00000699827.1:c.1862A>C	ENSP00000514628.1:p.Glu621Ala
ENST00000699828.1:c.*1120A>C	ENSP00000514629.1:n.*1120A>C
ENST00000699833.1:n.3802A>C
ENST00000699837.1:c.1625A>C	ENSP00000514635.1:p.Glu542Ala
ENST00000699838.1:c.*1930A>C	ENSP00000514636.1:n.*1930A>C
ENST00000699839.1:c.2216A>C	ENSP00000514637.1:p.Glu739Ala
ENST00000699916.1:c.*1287A>C	ENSP00000514684.1:n.*1287A>C
ENST00000699917.1:c.*1479A>C	ENSP00000514685.1:n.*1479A>C
ENST00000699918.1:c.*1531A>C	ENSP00000514686.1:n.*1531A>C
ENST00000699919.1:c.*1617A>C	ENSP00000514687.1:n.*1617A>C
ENST00000699920.1:c.*1666A>C	ENSP00000514688.1:n.*1666A>C
ENST00000699928.1:c.1012A>C	ENSP00000514693.1:p.Lys338Gln
ENST00000699951.1:c.*1126A>C	ENSP00000514706.1:n.*1126A>C
ENST00000699952.1:c.804-9426A>C	ENSP00000514707.1:n.804-9426A>C
ENST00000265849.12:c.2030A>C MANE Select	ENSP00000265849.7:p.Glu677Ala
ENST00000642292.1:c.1625A>C	ENSP00000495524.1:p.Glu542Ala
ENST00000642456.1:c.1625A>C	ENSP00000493814.1:p.Glu542Ala
ENST00000643595.1:c.*1429A>C	ENSP00000494497.1:n.*1429A>C
ENST00000644110.1:c.1712A>C	ENSP00000496392.1:p.Glu571Ala
ENST00000265849.11:c.2030A>C	ENSP00000265849.7:p.Glu677Ala
ENST00000382321.5:c.827A>C	ENSP00000371758.4:p.Glu276Ala
ENST00000406569.7:n.1678+4119A>C
ENST00000441476.6:c.1712A>C	ENSP00000392843.2:p.Glu571Ala
ENST00000469652.1:n.63-63A>C
NM_000535.5:c.2030A>C , LRG_161t1:c.2030A>C	NP_000526.1:p.Glu677Ala
NR_003085.2:n.2112A>C
XM_006715742.2:c.2024A>C	XP_006715805.1:p.Glu675Ala
XM_006715744.2:c.1097A>C	XP_006715807.1:p.Glu366Ala
XM_011515427.1:c.2075A>C	XP_011513729.1:p.Glu692Ala
XM_011515428.1:c.1919A>C	XP_011513730.1:p.Glu640Ala
XM_011515429.1:c.1712A>C	XP_011513731.1:p.Glu571Ala
XM_011515430.1:c.1712A>C	XP_011513732.1:p.Glu571Ala
NM_000535.6:c.2030A>C	NP_000526.2:p.Glu677Ala
NM_001322003.1:c.1625A>C	NP_001308932.1:p.Glu542Ala
NM_001322004.1:c.1625A>C	NP_001308933.1:p.Glu542Ala
NM_001322005.1:c.1625A>C	NP_001308934.1:p.Glu542Ala
NM_001322006.1:c.1874A>C	NP_001308935.1:p.Glu625Ala
NM_001322007.1:c.1712A>C	NP_001308936.1:p.Glu571Ala
NM_001322008.1:c.1712A>C	NP_001308937.1:p.Glu571Ala
NM_001322009.1:c.1625A>C	NP_001308938.1:p.Glu542Ala
NM_001322010.1:c.1469A>C	NP_001308939.1:p.Glu490Ala
NM_001322011.1:c.1097A>C	NP_001308940.1:p.Glu366Ala
NM_001322012.1:c.1097A>C	NP_001308941.1:p.Glu366Ala
NM_001322013.1:c.1457A>C	NP_001308942.1:p.Glu486Ala
NM_001322014.1:c.2030A>C	NP_001308943.1:p.Glu677Ala
NM_001322015.1:c.1721A>C	NP_001308944.1:p.Glu574Ala
NR_136154.1:n.2117A>C
XM_006715744.4:c.1097A>C	XP_006715807.1:p.Glu366Ala
XM_017012342.2:c.1097A>C	XP_016867831.1:p.Glu366Ala
XM_024446800.1:c.1469A>C	XP_024302568.1:p.Glu490Ala
NM_000535.7:c.2030A>C MANE Select	NP_000526.2:p.Glu677Ala
NM_001322003.2:c.1625A>C	NP_001308932.1:p.Glu542Ala
NM_001322004.2:c.1625A>C	NP_001308933.1:p.Glu542Ala
NM_001322005.2:c.1625A>C	NP_001308934.1:p.Glu542Ala
NM_001322006.2:c.1874A>C	NP_001308935.1:p.Glu625Ala
NM_001322008.2:c.1712A>C	NP_001308937.1:p.Glu571Ala
NM_001322009.2:c.1625A>C	NP_001308938.1:p.Glu542Ala
NM_001322010.2:c.1469A>C	NP_001308939.1:p.Glu490Ala
NM_001322011.2:c.1097A>C	NP_001308940.1:p.Glu366Ala
NM_001322012.2:c.1097A>C	NP_001308941.1:p.Glu366Ala
NM_001322013.2:c.1457A>C	NP_001308942.1:p.Glu486Ala
NM_001322014.2:c.2030A>C	NP_001308943.1:p.Glu677Ala
NM_001322015.2:c.1721A>C	NP_001308944.1:p.Glu574Ala
NM_001322007.2:c.1712A>C	NP_001308936.1:p.Glu571Ala