Canonical Allele Identifier: CA366734736

Gene: PMS2

Linked Data

• MyVariant Identifiers: chr7:g.6013044T>A (hg19) ; chr7:g.5973413T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5973413T>A , CM000669.2:g.5973413T>A	GRCh38
NC_000007.13:g.6013044T>A , CM000669.1:g.6013044T>A	GRCh37
NC_000007.12:g.5979570T>A	NCBI36
NG_008466.1:g.40694A>T , LRG_161:g.40694A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000699814.2:c.*1971A>T	ENSP00000514615.2:n.*1971A>T
ENST00000699840.2:c.2572A>T	ENSP00000514638.2:p.Ile858Phe
ENST00000699930.2:c.2467A>T	ENSP00000514695.2:p.Ile823Phe
ENST00000406569.8:c.1935A>T	ENSP00000514464.1:n.1935A>T
ENST00000644110.2:c.*2169A>T	ENSP00000496392.2:n.*2169A>T
ENST00000699752.1:c.2419A>T	ENSP00000514561.1:p.Ile807Phe
ENST00000699753.1:c.*1996A>T	ENSP00000514562.1:n.*1996A>T
ENST00000699754.1:c.2377A>T	ENSP00000514563.1:p.Ile793Phe
ENST00000699755.1:c.*1974A>T	ENSP00000514564.1:n.*1974A>T
ENST00000699756.1:c.*2162A>T	ENSP00000514565.1:n.*2162A>T
ENST00000699757.1:c.*1832A>T	ENSP00000514566.1:n.*1832A>T
ENST00000699758.1:c.*1832A>T	ENSP00000514567.1:n.*1832A>T
ENST00000699759.1:n.3429A>T
ENST00000699760.1:c.2257A>T	ENSP00000514568.1:p.Ile753Phe
ENST00000699761.1:c.2170A>T	ENSP00000514569.1:p.Ile724Phe
ENST00000699762.1:c.2002A>T	ENSP00000514570.1:p.Ile668Phe
ENST00000699763.1:c.*1665A>T	ENSP00000514571.1:n.*1665A>T
ENST00000699764.1:c.*893A>T	ENSP00000514572.1:n.*893A>T
ENST00000699765.1:c.*1570A>T	ENSP00000514573.1:n.*1570A>T
ENST00000699766.1:c.2608A>T	ENSP00000514574.1:p.Ile870Phe
ENST00000699767.1:c.*216A>T	ENSP00000514575.1:n.*216A>T
ENST00000699768.1:c.2431A>T	ENSP00000514576.1:p.Ile811Phe
ENST00000699811.1:c.2170A>T	ENSP00000514614.1:p.Ile724Phe
ENST00000699813.1:n.2688A>T
ENST00000699814.1:c.2198A>T
ENST00000699815.1:c.*2106A>T	ENSP00000514616.1:n.*2106A>T
ENST00000699816.1:c.*1465A>T	ENSP00000514617.1:n.*1465A>T
ENST00000699817.1:c.*2169A>T	ENSP00000514618.1:n.*2169A>T
ENST00000699818.1:c.2170A>T	ENSP00000514619.1:p.Ile724Phe
ENST00000699819.1:c.*1732A>T	ENSP00000514620.1:n.*1732A>T
ENST00000699820.1:c.*513A>T	ENSP00000514621.1:n.*513A>T
ENST00000699821.1:c.2203A>T	ENSP00000514622.1:p.Ile735Phe
ENST00000699822.1:c.*2027A>T	ENSP00000514623.1:n.*2027A>T
ENST00000699823.1:c.2170A>T	ENSP00000514624.1:p.Ile724Phe
ENST00000699824.1:c.*2078A>T	ENSP00000514625.1:n.*2078A>T
ENST00000699825.1:c.2014A>T	ENSP00000514626.1:p.Ile672Phe
ENST00000699826.1:c.*1974A>T	ENSP00000514627.1:n.*1974A>T
ENST00000699827.1:c.2407A>T	ENSP00000514628.1:p.Ile803Phe
ENST00000699828.1:c.*1665A>T	ENSP00000514629.1:n.*1665A>T
ENST00000699833.1:n.4347A>T
ENST00000699837.1:c.2170A>T	ENSP00000514635.1:p.Ile724Phe
ENST00000699838.1:c.*2475A>T	ENSP00000514636.1:n.*2475A>T
ENST00000699839.1:c.2761A>T	ENSP00000514637.1:p.Ile921Phe
ENST00000699916.1:c.*1832A>T	ENSP00000514684.1:n.*1832A>T
ENST00000699917.1:c.*2024A>T	ENSP00000514685.1:n.*2024A>T
ENST00000699918.1:c.*2076A>T	ENSP00000514686.1:n.*2076A>T
ENST00000699919.1:c.*2162A>T	ENSP00000514687.1:n.*2162A>T
ENST00000699920.1:c.*2211A>T	ENSP00000514688.1:n.*2211A>T
ENST00000699928.1:c.*513A>T	ENSP00000514693.1:n.*513A>T
ENST00000699951.1:c.*1628A>T	ENSP00000514706.1:n.*1628A>T
ENST00000699952.1:c.*129A>T	ENSP00000514707.1:n.*129A>T
ENST00000265849.12:c.2575A>T MANE Select	ENSP00000265849.7:p.Ile859Phe
ENST00000642292.1:c.2170A>T	ENSP00000495524.1:p.Ile724Phe
ENST00000642456.1:c.2170A>T	ENSP00000493814.1:p.Ile724Phe
ENST00000643595.1:c.*1974A>T	ENSP00000494497.1:n.*1974A>T
ENST00000644110.1:c.2257A>T	ENSP00000496392.1:p.Ile753Phe
ENST00000265849.11:c.2575A>T	ENSP00000265849.7:p.Ile859Phe
ENST00000382321.5:c.1372A>T	ENSP00000371758.4:p.Ile458Phe
ENST00000441476.6:c.2257A>T	ENSP00000392843.2:p.Ile753Phe
NM_000535.5:c.2575A>T , LRG_161t1:c.2575A>T	NP_000526.1:p.Ile859Phe
NR_003085.2:n.2657A>T
XM_006715742.2:c.2569A>T	XP_006715805.1:p.Ile857Phe
XM_006715744.2:c.1642A>T	XP_006715807.1:p.Ile548Phe
XM_011515427.1:c.2620A>T	XP_011513729.1:p.Ile874Phe
XM_011515428.1:c.2464A>T	XP_011513730.1:p.Ile822Phe
XM_011515429.1:c.2257A>T	XP_011513731.1:p.Ile753Phe
XM_011515430.1:c.2257A>T	XP_011513732.1:p.Ile753Phe
NM_000535.6:c.2575A>T	NP_000526.2:p.Ile859Phe
NM_001322003.1:c.2170A>T	NP_001308932.1:p.Ile724Phe
NM_001322004.1:c.2170A>T	NP_001308933.1:p.Ile724Phe
NM_001322005.1:c.2170A>T	NP_001308934.1:p.Ile724Phe
NM_001322006.1:c.2419A>T	NP_001308935.1:p.Ile807Phe
NM_001322007.1:c.2257A>T	NP_001308936.1:p.Ile753Phe
NM_001322008.1:c.2257A>T	NP_001308937.1:p.Ile753Phe
NM_001322009.1:c.2203A>T	NP_001308938.1:p.Ile735Phe
NM_001322010.1:c.2014A>T	NP_001308939.1:p.Ile672Phe
NM_001322011.1:c.1642A>T	NP_001308940.1:p.Ile548Phe
NM_001322012.1:c.1642A>T	NP_001308941.1:p.Ile548Phe
NM_001322013.1:c.2002A>T	NP_001308942.1:p.Ile668Phe
NM_001322014.1:c.2608A>T	NP_001308943.1:p.Ile870Phe
NM_001322015.1:c.2266A>T	NP_001308944.1:p.Ile756Phe
NR_136154.1:n.2619A>T
XM_006715744.4:c.1642A>T	XP_006715807.1:p.Ile548Phe
XM_017012342.2:c.1642A>T	XP_016867831.1:p.Ile548Phe
XM_024446800.1:c.2014A>T	XP_024302568.1:p.Ile672Phe
NM_000535.7:c.2575A>T MANE Select	NP_000526.2:p.Ile859Phe
NM_001322003.2:c.2170A>T	NP_001308932.1:p.Ile724Phe
NM_001322004.2:c.2170A>T	NP_001308933.1:p.Ile724Phe
NM_001322005.2:c.2170A>T	NP_001308934.1:p.Ile724Phe
NM_001322006.2:c.2419A>T	NP_001308935.1:p.Ile807Phe
NM_001322008.2:c.2257A>T	NP_001308937.1:p.Ile753Phe
NM_001322009.2:c.2203A>T	NP_001308938.1:p.Ile735Phe
NM_001322010.2:c.2014A>T	NP_001308939.1:p.Ile672Phe
NM_001322011.2:c.1642A>T	NP_001308940.1:p.Ile548Phe
NM_001322012.2:c.1642A>T	NP_001308941.1:p.Ile548Phe
NM_001322013.2:c.2002A>T	NP_001308942.1:p.Ile668Phe
NM_001322014.2:c.2608A>T	NP_001308943.1:p.Ile870Phe
NM_001322015.2:c.2266A>T	NP_001308944.1:p.Ile756Phe
NM_001322007.2:c.2257A>T	NP_001308936.1:p.Ile753Phe