Canonical Allele Identifier: CA352064896

Gene: MLH1

Linked Data

• ClinVar Variation Id: 2773581
• ClinVar RCV Id: RCV003584438
• dbSNP Id: rs1553662916
• gnomAD v4: 3-37047606-C-A
• MyVariant Identifiers: chr3:g.37089097C>A (hg19) ; chr3:g.37047606C>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.37047606C>A , CM000665.2:g.37047606C>A	GRCh38
NC_000003.11:g.37089097C>A , CM000665.1:g.37089097C>A	GRCh37
NC_000003.10:g.37064101C>A	NCBI36
NG_007109.2:g.59257C>A , LRG_216:g.59257C>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000413740.2:c.1668-2880C>A	ENSP00000416476.2:n.1668-2880C>A
ENST00000429117.6:c.1525C>A	ENSP00000407019.2:p.Leu509Ile
ENST00000450420.6:c.1559-2880C>A	ENSP00000393006.2:n.1559-2880C>A
ENST00000456676.7:c.1819C>A	ENSP00000416687.3:p.Leu607Ile
ENST00000492474.6:c.1096C>A	ENSP00000518393.1:p.Leu366Ile
ENST00000616768.6:c.1819C>A	ENSP00000480669.3:p.Leu607Ile
ENST00000673673.2:c.1732-911C>A	ENSP00000500979.2:n.1732-911C>A
ENST00000231790.8:c.1819C>A MANE Select	ENSP00000231790.3:p.Leu607Ile
ENST00000413212.2:c.*737C>A	ENSP00000400844.2:n.*737C>A
ENST00000432299.6:c.*1651C>A	ENSP00000416783.1:n.*1651C>A
ENST00000441265.6:c.*48C>A	ENSP00000398392.2:n.*48C>A
ENST00000447829.6:c.*930C>A	ENSP00000399329.2:n.*930C>A
ENST00000539477.6:c.1096C>A	ENSP00000443665.1:p.Leu366Ile
ENST00000616768.5:c.856C>A	ENSP00000480669.2:p.Leu286Ile
ENST00000673673.1:c.1685-911C>A
ENST00000673715.1:c.1819C>A	ENSP00000501301.1:p.Leu607Ile
ENST00000673741.1:n.853C>A
ENST00000673889.1:n.1201C>A
ENST00000673897.1:c.*1611C>A	ENSP00000501109.1:n.*1611C>A
ENST00000673899.1:c.1087C>A	ENSP00000501030.1:p.Leu363Ile
ENST00000673947.1:c.*1959C>A	ENSP00000501304.1:n.*1959C>A
ENST00000673972.1:c.*1697C>A	ENSP00000501281.1:n.*1697C>A
ENST00000673990.1:n.1710C>A
ENST00000674019.1:c.1096C>A	ENSP00000501081.1:p.Leu366Ile
ENST00000674111.1:c.*48C>A	ENSP00000501162.1:n.*48C>A
ENST00000674125.1:n.530C>A
ENST00000231790.6:c.1819C>A	ENSP00000231790.2:p.Leu607Ile
ENST00000413740.1:c.291-2880C>A	ENSP00000416476.1:n.291-2880C>A
ENST00000435176.5:c.1525C>A	ENSP00000402564.1:p.Leu509Ile
ENST00000450420.5:c.182-2880C>A	ENSP00000393006.1:n.182-2880C>A
ENST00000455445.6:c.1096C>A	ENSP00000398272.2:p.Leu366Ile
ENST00000456676.6:c.1794C>A
ENST00000458205.6:c.1096C>A	ENSP00000402667.2:p.Leu366Ile
ENST00000536378.5:c.1096C>A	ENSP00000444286.2:p.Leu366Ile
ENST00000539477.5:c.1096C>A	ENSP00000443665.1:p.Leu366Ile
ENST00000616768.4:c.587C>A
NM_000249.3:c.1819C>A , LRG_216t1:c.1819C>A	NP_000240.1:p.Leu607Ile
NM_001167617.1:c.1525C>A	NP_001161089.1:p.Leu509Ile
NM_001167618.1:c.1096C>A	NP_001161090.1:p.Leu366Ile
NM_001167619.1:c.1096C>A	NP_001161091.1:p.Leu366Ile
NM_001258271.1:c.1819C>A	NP_001245200.1:p.Leu607Ile
NM_001258273.1:c.1096C>A	NP_001245202.1:p.Leu366Ile
NM_001258274.1:c.1096C>A	NP_001245203.1:p.Leu366Ile
XM_005265161.1:c.1612C>A	XP_005265218.1:p.Leu538Ile
XM_005265163.1:c.1096C>A	XP_005265220.1:p.Leu366Ile
XM_005265164.1:c.1096C>A	XP_005265221.1:p.Leu366Ile
XM_005265166.1:c.796C>A	XP_005265223.1:p.Leu266Ile
XM_011533727.1:c.745C>A	XP_011532029.1:p.Leu249Ile
NM_001167617.2:c.1525C>A	NP_001161089.1:p.Leu509Ile
NM_001167618.2:c.1096C>A	NP_001161090.1:p.Leu366Ile
NM_001167619.2:c.1096C>A	NP_001161091.1:p.Leu366Ile
NM_001258274.2:c.1096C>A	NP_001245203.1:p.Leu366Ile
NM_001354615.1:c.1096C>A	NP_001341544.1:p.Leu366Ile
NM_001354616.1:c.1096C>A	NP_001341545.1:p.Leu366Ile
NM_001354617.1:c.1096C>A	NP_001341546.1:p.Leu366Ile
NM_001354618.1:c.1096C>A	NP_001341547.1:p.Leu366Ile
NM_001354619.1:c.1096C>A	NP_001341548.1:p.Leu366Ile
NM_001354620.1:c.1525C>A	NP_001341549.1:p.Leu509Ile
NM_001354621.1:c.796C>A	NP_001341550.1:p.Leu266Ile
NM_001354622.1:c.796C>A	NP_001341551.1:p.Leu266Ile
NM_001354623.1:c.796C>A	NP_001341552.1:p.Leu266Ile
NM_001354624.1:c.745C>A	NP_001341553.1:p.Leu249Ile
NM_001354625.1:c.745C>A	NP_001341554.1:p.Leu249Ile
NM_001354626.1:c.745C>A	NP_001341555.1:p.Leu249Ile
NM_001354627.1:c.745C>A	NP_001341556.1:p.Leu249Ile
NM_001354628.1:c.1819C>A	NP_001341557.1:p.Leu607Ile
NM_001354629.1:c.1720C>A	NP_001341558.1:p.Leu574Ile
NM_001354630.1:c.1732-911C>A	NP_001341559.1:n.1732-911C>A
XM_005265161.2:c.1612C>A	XP_005265218.1:p.Leu538Ile
XM_017006450.2:c.796C>A	XP_016861939.1:p.Leu266Ile
NM_000249.4:c.1819C>A MANE Select	NP_000240.1:p.Leu607Ile
NM_001167617.3:c.1525C>A	NP_001161089.1:p.Leu509Ile
NM_001167618.3:c.1096C>A	NP_001161090.1:p.Leu366Ile
NM_001167619.3:c.1096C>A	NP_001161091.1:p.Leu366Ile
NM_001258271.2:c.1819C>A	NP_001245200.1:p.Leu607Ile
NM_001258273.2:c.1096C>A	NP_001245202.1:p.Leu366Ile
NM_001258274.3:c.1096C>A	NP_001245203.1:p.Leu366Ile
NM_001354615.2:c.1096C>A	NP_001341544.1:p.Leu366Ile
NM_001354616.2:c.1096C>A	NP_001341545.1:p.Leu366Ile
NM_001354617.2:c.1096C>A	NP_001341546.1:p.Leu366Ile
NM_001354618.2:c.1096C>A	NP_001341547.1:p.Leu366Ile
NM_001354619.2:c.1096C>A	NP_001341548.1:p.Leu366Ile
NM_001354620.2:c.1525C>A	NP_001341549.1:p.Leu509Ile
NM_001354621.2:c.796C>A	NP_001341550.1:p.Leu266Ile
NM_001354622.2:c.796C>A	NP_001341551.1:p.Leu266Ile
NM_001354623.2:c.796C>A	NP_001341552.1:p.Leu266Ile
NM_001354624.2:c.745C>A	NP_001341553.1:p.Leu249Ile
NM_001354625.2:c.745C>A	NP_001341554.1:p.Leu249Ile
NM_001354626.2:c.745C>A	NP_001341555.1:p.Leu249Ile
NM_001354627.2:c.745C>A	NP_001341556.1:p.Leu249Ile
NM_001354628.2:c.1819C>A	NP_001341557.1:p.Leu607Ile
NM_001354629.2:c.1720C>A	NP_001341558.1:p.Leu574Ile
NM_001354630.2:c.1732-911C>A	NP_001341559.1:n.1732-911C>A