Canonical Allele Identifier: CA349072009

Gene: SCN9A SCN1A-AS1

Linked Data

• MyVariant Identifiers: chr2:g.167108345C>G (hg19) ; chr2:g.166251835C>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166251835C>G , CM000664.2:g.166251835C>G	GRCh38
NC_000002.11:g.167108345C>G , CM000664.1:g.167108345C>G	GRCh37
NC_000002.10:g.166816591C>G	NCBI36
NG_012798.1:g.129153G>C , LRG_369:g.129153G>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000303354.11:c.3402G>C (SCN9A)	ENSP00000304748.7:p.Leu1134Phe
ENST00000409435.6:c.3402G>C (SCN9A)	ENSP00000386330.2:p.Leu1134Phe
ENST00000642356.2:c.3402G>C (SCN9A) MANE Select	ENSP00000495601.1:p.Leu1134Phe
ENST00000643319.1:c.484G>C (SCN9A)	ENSP00000494071.1:n.484G>C
ENST00000644316.1:c.3369G>C (SCN9A)	ENSP00000493939.1:p.Leu1123Phe
ENST00000645907.1:c.3369G>C (SCN9A)	ENSP00000495983.1:p.Leu1123Phe
ENST00000667201.2:c.2027G>C (SCN9A)
ENST00000303354.10:c.3402G>C (SCN9A)	ENSP00000304748.7:p.Leu1134Phe
ENST00000409435.5:c.3402G>C (SCN9A)	ENSP00000386330.1:p.Leu1134Phe
ENST00000409672.5:c.3369G>C (SCN9A)	ENSP00000386306.1:p.Leu1123Phe
NM_002977.3:c.3369G>C , LRG_369t1:c.3369G>C (SCN9A)	NP_002968.1:p.Leu1123Phe
NR_110260.1:n.792C>G (SCN1A-AS1)
XM_005246757.1:c.3402G>C (SCN9A)	XP_005246814.1:p.Leu1134Phe
XM_011511616.1:c.3402G>C (SCN9A)	XP_011509918.1:p.Leu1134Phe
XM_011511617.1:c.3402G>C (SCN9A)	XP_011509919.1:p.Leu1134Phe
XM_011511618.1:c.3369G>C (SCN9A)	XP_011509920.1:p.Leu1123Phe
XM_011511619.1:c.3402G>C (SCN9A)	XP_011509921.1:p.Leu1134Phe
NM_001365536.1:c.3402G>C (SCN9A) MANE Select	NP_001352465.1:p.Leu1134Phe
XM_011511616.3:c.3402G>C (SCN9A)	XP_011509918.1:p.Leu1134Phe
XM_011511617.2:c.3402G>C (SCN9A)	XP_011509919.1:p.Leu1134Phe
XM_011511618.2:c.3369G>C (SCN9A)	XP_011509920.1:p.Leu1123Phe
XM_011511619.2:c.3402G>C (SCN9A)	XP_011509921.1:p.Leu1134Phe
XM_017004668.1:c.3015G>C (SCN9A)	XP_016860157.1:p.Leu1005Phe
XM_017004669.1:c.2658G>C (SCN9A)	XP_016860158.1:p.Leu886Phe