Canonical Allele Identifier: CA346760572

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 2587342
• ClinVar RCV Id: RCV003360820
• dbSNP Id: rs2104524707
• MyVariant Identifiers: chr2:g.48032811C>T (hg19) ; chr2:g.47805672C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47805672C>T , CM000664.2:g.47805672C>T	GRCh38
NC_000002.11:g.48032811C>T , CM000664.1:g.48032811C>T	GRCh37
NC_000002.10:g.47886315C>T	NCBI36
NG_007111.1:g.27526C>T , LRG_219:g.27526C>T
NG_008397.1:g.105004G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.3314C>T (MSH6)	ENSP00000406248.2:p.Ala1105Val
ENST00000420813.6:c.3314C>T (MSH6)	ENSP00000390382.2:p.Ala1105Val
ENST00000455383.6:c.3314C>T (MSH6)	ENSP00000397484.2:p.Ala1105Val
ENST00000700004.2:c.3227C>T (MSH6)	ENSP00000514752.2:p.Ala1076Val
ENST00000699999.1:n.4285C>T (MSH6)
ENST00000700000.1:c.2045C>T (MSH6)	ENSP00000514749.1:p.Ala682Val
ENST00000700002.1:c.3617C>T (MSH6)	ENSP00000514750.1:p.Ala1206Val
ENST00000700003.1:c.1066C>T (MSH6)	ENSP00000514751.1:n.1066C>T
ENST00000700004.1:c.2384C>T (MSH6)	ENSP00000514752.1:p.Ala795Val
ENST00000700005.1:n.2462C>T (MSH6)
ENST00000700006.1:n.4273C>T (MSH6)
ENST00000700007.1:n.2206C>T (MSH6)
ENST00000700008.1:n.1780C>T (MSH6)
ENST00000700009.1:n.1779C>T (MSH6)
ENST00000700010.1:n.1020C>T (MSH6)
ENST00000700011.1:n.2905C>T (MSH6)
ENST00000234420.11:c.3611C>T (MSH6) MANE Select	ENSP00000234420.5:p.Ala1204Val
ENST00000540021.6:c.3221C>T (MSH6)	ENSP00000446475.1:p.Ala1074Val
ENST00000652107.1:c.3314C>T (MSH6)	ENSP00000498629.1:p.Ala1105Val
ENST00000673637.1:c.3314C>T (MSH6)	ENSP00000501310.1:p.Ala1105Val
ENST00000234420.9:c.3611C>T (MSH6)	ENSP00000234420.4:p.Ala1204Val
ENST00000405808.5:c.169+2523G>A (FBXO11)	ENSP00000385127.1:n.169+2523G>A
ENST00000434234.5:c.*124+2322G>A (FBXO11)	ENSP00000402692.1:n.*124+2322G>A
ENST00000445503.5:c.*2958C>T (MSH6)	ENSP00000405294.1:n.*2958C>T
ENST00000538136.1:c.2705C>T (MSH6)	ENSP00000438580.1:p.Ala902Val
ENST00000540021.5:c.3221C>T (MSH6)	ENSP00000446475.1:p.Ala1074Val
ENST00000614496.4:c.2705C>T (MSH6)	ENSP00000477844.1:p.Ala902Val
ENST00000622629.4:c.515C>T (MSH6)	ENSP00000482078.1:p.Ala172Val
NM_000179.2:c.3611C>T , LRG_219t1:c.3611C>T (MSH6)	NP_000170.1:p.Ala1204Val
NM_001281492.1:c.3221C>T (MSH6)	NP_001268421.1:p.Ala1074Val
NM_001281493.1:c.2705C>T (MSH6)	NP_001268422.1:p.Ala902Val
NM_001281494.1:c.2705C>T (MSH6)	NP_001268423.1:p.Ala902Val
XM_005264271.1:c.3314C>T (MSH6)	XP_005264328.1:p.Ala1105Val
XM_011532798.1:c.3428C>T (MSH6)	XP_011531100.1:p.Ala1143Val
XM_011532799.1:c.3314C>T (MSH6)	XP_011531101.1:p.Ala1105Val
XM_011532800.1:c.3314C>T (MSH6)	XP_011531102.1:p.Ala1105Val
XM_024452819.1:c.3611C>T (MSH6)	XP_024308587.1:p.Ala1204Val
XM_024452820.1:c.3428C>T (MSH6)	XP_024308588.1:p.Ala1143Val
XM_024452821.1:c.3314C>T (MSH6)	XP_024308589.1:p.Ala1105Val
XM_024452822.1:c.2705C>T (MSH6)	XP_024308590.1:p.Ala902Val
NM_000179.3:c.3611C>T (MSH6) MANE Select	NP_000170.1:p.Ala1204Val
NM_001281492.2:c.3221C>T (MSH6)	NP_001268421.1:p.Ala1074Val
NM_001281493.2:c.2705C>T (MSH6)	NP_001268422.1:p.Ala902Val
NM_001281494.2:c.2705C>T (MSH6)	NP_001268423.1:p.Ala902Val