Canonical Allele Identifier: CA346756455

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 479950
• ClinVar RCV Id: RCV000573950 ; RCV001233423 ; RCV004000885
• dbSNP Id: rs1553414407
• gnomAD v4: 2-47801011-A-T
• MyVariant Identifiers: chr2:g.48028150A>T (hg19) ; chr2:g.47801011A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47801011A>T , CM000664.2:g.47801011A>T	GRCh38
NC_000002.11:g.48028150A>T , CM000664.1:g.48028150A>T	GRCh37
NC_000002.10:g.47881654A>T	NCBI36
NG_007111.1:g.22865A>T , LRG_219:g.22865A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.2731A>T (MSH6)	ENSP00000406248.2:p.Thr911Ser
ENST00000420813.6:c.2731A>T (MSH6)	ENSP00000390382.2:p.Thr911Ser
ENST00000455383.6:c.2731A>T (MSH6)	ENSP00000397484.2:p.Thr911Ser
ENST00000700004.2:c.3028A>T (MSH6)	ENSP00000514752.2:p.Thr1010Ser
ENST00000699999.1:n.3112A>T (MSH6)
ENST00000700000.1:c.1606+1422A>T (MSH6)	ENSP00000514749.1:n.1606+1422A>T
ENST00000700002.1:c.3034A>T (MSH6)	ENSP00000514750.1:p.Thr1012Ser
ENST00000700003.1:c.628-2409A>T (MSH6)	ENSP00000514751.1:n.628-2409A>T
ENST00000700004.1:c.2185A>T (MSH6)	ENSP00000514752.1:p.Thr729Ser
ENST00000234420.11:c.3028A>T (MSH6) MANE Select	ENSP00000234420.5:p.Thr1010Ser
ENST00000540021.6:c.2638A>T (MSH6)	ENSP00000446475.1:p.Thr880Ser
ENST00000652107.1:c.2731A>T (MSH6)	ENSP00000498629.1:p.Thr911Ser
ENST00000673637.1:c.2731A>T (MSH6)	ENSP00000501310.1:p.Thr911Ser
ENST00000234420.9:c.3028A>T (MSH6)	ENSP00000234420.4:p.Thr1010Ser
ENST00000405808.5:c.169+7184T>A (FBXO11)	ENSP00000385127.1:n.169+7184T>A
ENST00000434234.5:c.*124+6983T>A (FBXO11)	ENSP00000402692.1:n.*124+6983T>A
ENST00000445503.5:c.*2375A>T (MSH6)	ENSP00000405294.1:n.*2375A>T
ENST00000538136.1:c.2122A>T (MSH6)	ENSP00000438580.1:p.Thr708Ser
ENST00000540021.5:c.2638A>T (MSH6)	ENSP00000446475.1:p.Thr880Ser
ENST00000614496.4:c.2122A>T (MSH6)	ENSP00000477844.1:p.Thr708Ser
ENST00000616033.4:c.3025A>T (MSH6)	ENSP00000480261.1:p.Thr1009Ser
ENST00000622629.4:c.-69A>T (MSH6)	ENSP00000482078.1:n.-69A>T
NM_000179.2:c.3028A>T , LRG_219t1:c.3028A>T (MSH6)	NP_000170.1:p.Thr1010Ser
NM_001281492.1:c.2638A>T (MSH6)	NP_001268421.1:p.Thr880Ser
NM_001281493.1:c.2122A>T (MSH6)	NP_001268422.1:p.Thr708Ser
NM_001281494.1:c.2122A>T (MSH6)	NP_001268423.1:p.Thr708Ser
XM_005264271.1:c.2731A>T (MSH6)	XP_005264328.1:p.Thr911Ser
XM_011532798.1:c.2845A>T (MSH6)	XP_011531100.1:p.Thr949Ser
XM_011532799.1:c.2731A>T (MSH6)	XP_011531101.1:p.Thr911Ser
XM_011532800.1:c.2731A>T (MSH6)	XP_011531102.1:p.Thr911Ser
XM_024452819.1:c.3028A>T (MSH6)	XP_024308587.1:p.Thr1010Ser
XM_024452820.1:c.2845A>T (MSH6)	XP_024308588.1:p.Thr949Ser
XM_024452821.1:c.2731A>T (MSH6)	XP_024308589.1:p.Thr911Ser
XM_024452822.1:c.2122A>T (MSH6)	XP_024308590.1:p.Thr708Ser
NM_000179.3:c.3028A>T (MSH6) MANE Select	NP_000170.1:p.Thr1010Ser
NM_001281492.2:c.2638A>T (MSH6)	NP_001268421.1:p.Thr880Ser
NM_001281493.2:c.2122A>T (MSH6)	NP_001268422.1:p.Thr708Ser
NM_001281494.2:c.2122A>T (MSH6)	NP_001268423.1:p.Thr708Ser