Linked Data
ClinVar Variation Id:
479969
dbSNP Id:
rs1553413208
gnomAD v3:
2-47799806-T-C
gnomAD v4:
2-47799806-T-C
Genomic Alleles
| HGVS | Genome Assembly |
|---|---|
| NC_000002.12:g.47799806T>C , CM000664.2:g.47799806T>C | GRCh38 |
| NC_000002.11:g.48026945T>C , CM000664.1:g.48026945T>C | GRCh37 |
| NC_000002.10:g.47880449T>C | NCBI36 |
| NG_007111.1:g.21660T>C , LRG_219:g.21660T>C |
Transcript Alleles
| HGVS | Amino-acid Change | |
|---|---|---|
| ENST00000411819.2:c.1526T>C (MSH6) | ENSP00000406248.2:p.Ile509Thr | |
| ENST00000420813.6:c.1526T>C (MSH6) | ENSP00000390382.2:p.Ile509Thr | |
| ENST00000455383.6:c.1526T>C (MSH6) | ENSP00000397484.2:p.Ile509Thr | |
| ENST00000700004.2:c.1823T>C (MSH6) | ENSP00000514752.2:p.Ile608Thr | |
| ENST00000699999.1:n.1907T>C (MSH6) | ||
| ENST00000700000.1:c.1606+217T>C (MSH6) | ENSP00000514749.1:n.1606+217T>C | |
| ENST00000700002.1:c.1829T>C (MSH6) | ENSP00000514750.1:p.Ile610Thr | |
| ENST00000700003.1:c.628-3614T>C (MSH6) | ENSP00000514751.1:n.628-3614T>C | |
| ENST00000700004.1:c.980T>C (MSH6) | ENSP00000514752.1:p.Ile327Thr | |
| ENST00000234420.11:c.1823T>C (MSH6) MANE Select | ENSP00000234420.5:p.Ile608Thr | |
| ENST00000540021.6:c.1433T>C (MSH6) | ENSP00000446475.1:p.Ile478Thr | |
| ENST00000652107.1:c.1526T>C (MSH6) | ENSP00000498629.1:p.Ile509Thr | |
| ENST00000673637.1:c.1526T>C (MSH6) | ENSP00000501310.1:p.Ile509Thr | |
| ENST00000234420.9:c.1823T>C (MSH6) | ENSP00000234420.4:p.Ile608Thr | |
| ENST00000405808.5:c.169+8389A>G (FBXO11) | ENSP00000385127.1:n.169+8389A>G | |
| ENST00000434234.5:c.*124+8188A>G (FBXO11) | ENSP00000402692.1:n.*124+8188A>G | |
| ENST00000445503.5:c.*1170T>C (MSH6) | ENSP00000405294.1:n.*1170T>C | |
| ENST00000538136.1:c.917T>C (MSH6) | ENSP00000438580.1:p.Ile306Thr | |
| ENST00000540021.5:c.1433T>C (MSH6) | ENSP00000446475.1:p.Ile478Thr | |
| ENST00000614496.4:c.917T>C (MSH6) | ENSP00000477844.1:p.Ile306Thr | |
| ENST00000616033.4:c.1820T>C (MSH6) | ENSP00000480261.1:p.Ile607Thr | |
| ENST00000622629.4:c.-1274T>C (MSH6) | ENSP00000482078.1:n.-1274T>C | |
| NM_000179.2:c.1823T>C , LRG_219t1:c.1823T>C (MSH6) | NP_000170.1:p.Ile608Thr | |
| NM_001281492.1:c.1433T>C (MSH6) | NP_001268421.1:p.Ile478Thr | |
| NM_001281493.1:c.917T>C (MSH6) | NP_001268422.1:p.Ile306Thr | |
| NM_001281494.1:c.917T>C (MSH6) | NP_001268423.1:p.Ile306Thr | |
| XM_005264271.1:c.1526T>C (MSH6) | XP_005264328.1:p.Ile509Thr | |
| XM_011532798.1:c.1640T>C (MSH6) | XP_011531100.1:p.Ile547Thr | |
| XM_011532799.1:c.1526T>C (MSH6) | XP_011531101.1:p.Ile509Thr | |
| XM_011532800.1:c.1526T>C (MSH6) | XP_011531102.1:p.Ile509Thr | |
| XM_024452819.1:c.1823T>C (MSH6) | XP_024308587.1:p.Ile608Thr | |
| XM_024452820.1:c.1640T>C (MSH6) | XP_024308588.1:p.Ile547Thr | |
| XM_024452821.1:c.1526T>C (MSH6) | XP_024308589.1:p.Ile509Thr | |
| XM_024452822.1:c.917T>C (MSH6) | XP_024308590.1:p.Ile306Thr | |
| NM_000179.3:c.1823T>C (MSH6) MANE Select | NP_000170.1:p.Ile608Thr | |
| NM_001281492.2:c.1433T>C (MSH6) | NP_001268421.1:p.Ile478Thr | |
| NM_001281493.2:c.917T>C (MSH6) | NP_001268422.1:p.Ile306Thr | |
| NM_001281494.2:c.917T>C (MSH6) | NP_001268423.1:p.Ile306Thr |