Canonical Allele Identifier: CA346731481

Gene: MSH2

Linked Data

• ClinVar Variation Id: 2852498
• ClinVar RCV Id: RCV003758648
• dbSNP Id: rs1196909514
• MyVariant Identifiers: chr2:g.47709953G>C (hg19) ; chr2:g.47482814G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47482814G>C , CM000664.2:g.47482814G>C	GRCh38
NC_000002.11:g.47709953G>C , CM000664.1:g.47709953G>C	GRCh37
NC_000002.10:g.47563457G>C	NCBI36
NG_007110.2:g.84691G>C , LRG_218:g.84691G>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.2634+1943G>C	ENSP00000495641.2:n.2634+1943G>C
ENST00000233146.7:c.2670G>C MANE Select	ENSP00000233146.2:p.Lys890Asn
ENST00000543555.6:c.2472G>C	ENSP00000442697.1:p.Lys824Asn
ENST00000644092.1:c.*934+1943G>C	ENSP00000496351.1:n.*934+1943G>C
ENST00000644900.1:c.487+1943G>C
ENST00000645339.1:c.2634+1943G>C	ENSP00000496441.1:n.2634+1943G>C
ENST00000645506.1:c.2634+1943G>C	ENSP00000495455.1:n.2634+1943G>C
ENST00000646415.1:c.2634+1943G>C	ENSP00000495543.1:n.2634+1943G>C
ENST00000233146.6:c.2670G>C	ENSP00000233146.2:p.Lys890Asn
ENST00000406134.5:c.2634+1943G>C	ENSP00000384199.1:n.2634+1943G>C
ENST00000461394.5:n.75+1943G>C
ENST00000543555.5:c.2472G>C	ENSP00000442697.1:p.Lys824Asn
ENST00000610696.4:c.*1066G>C	ENSP00000483159.1:n.*1066G>C
ENST00000613514.4:c.*1210G>C	ENSP00000484137.1:n.*1210G>C
ENST00000617333.3:c.*1436G>C	ENSP00000482468.1:n.*1436G>C
ENST00000617938.4:c.*1642G>C	ENSP00000481158.1:n.*1642G>C
ENST00000621359.2:c.*236G>C	ENSP00000481416.1:n.*236G>C
NM_000251.2:c.2670G>C , LRG_218t1:c.2670G>C	NP_000242.1:p.Lys890Asn
NM_001258281.1:c.2472G>C	NP_001245210.1:p.Lys824Asn
XM_005264332.2:c.2634+1943G>C	XP_005264389.2:n.2634+1943G>C
XM_011532867.1:c.2634+1943G>C	XP_011531169.1:n.2634+1943G>C
XR_939685.1:n.2706+1943G>C
XM_005264332.4:c.2634+1943G>C	XP_005264389.2:n.2634+1943G>C
XM_011532867.2:c.2634+1943G>C	XP_011531169.1:n.2634+1943G>C
XR_001738747.2:n.2696+1943G>C
XR_939685.2:n.2696+1943G>C
NM_000251.3:c.2670G>C MANE Select	NP_000242.1:p.Lys890Asn