Canonical Allele Identifier: CA346730014

Gene: MSH2

Linked Data

• dbSNP Id: rs774440277
• MyVariant Identifiers: chr2:g.47705562A>T (hg19) ; chr2:g.47478423A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47478423A>T , CM000664.2:g.47478423A>T	GRCh38
NC_000002.11:g.47705562A>T , CM000664.1:g.47705562A>T	GRCh37
NC_000002.10:g.47559066A>T	NCBI36
NG_007110.2:g.80300A>T , LRG_218:g.80300A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.2362A>T	ENSP00000495641.2:p.Thr788Ser
ENST00000233146.7:c.2362A>T MANE Select	ENSP00000233146.2:p.Thr788Ser
ENST00000543555.6:c.2164A>T	ENSP00000442697.1:p.Thr722Ser
ENST00000644092.1:c.*662A>T	ENSP00000496351.1:n.*662A>T
ENST00000644900.1:c.215A>T
ENST00000645339.1:c.2362A>T	ENSP00000496441.1:p.Thr788Ser
ENST00000645506.1:c.2362A>T	ENSP00000495455.1:p.Thr788Ser
ENST00000646415.1:c.2362A>T	ENSP00000495543.1:p.Thr788Ser
ENST00000233146.6:c.2362A>T	ENSP00000233146.2:p.Thr788Ser
ENST00000406134.5:c.2362A>T	ENSP00000384199.1:p.Thr788Ser
ENST00000543555.5:c.2164A>T	ENSP00000442697.1:p.Thr722Ser
ENST00000610696.4:c.*758A>T	ENSP00000483159.1:n.*758A>T
ENST00000613514.4:c.*902A>T	ENSP00000484137.1:n.*902A>T
ENST00000617333.3:c.*1128A>T	ENSP00000482468.1:n.*1128A>T
ENST00000617938.4:c.*1334A>T	ENSP00000481158.1:n.*1334A>T
ENST00000621359.2:c.2361A>T	ENSP00000481416.1:p.Leu787Phe
NM_000251.2:c.2362A>T , LRG_218t1:c.2362A>T	NP_000242.1:p.Thr788Ser
NM_001258281.1:c.2164A>T	NP_001245210.1:p.Thr722Ser
XM_005264332.2:c.2362A>T	XP_005264389.2:p.Thr788Ser
XM_011532867.1:c.2362A>T	XP_011531169.1:p.Thr788Ser
XR_939685.1:n.2434A>T
XM_005264332.4:c.2362A>T	XP_005264389.2:p.Thr788Ser
XM_011532867.2:c.2362A>T	XP_011531169.1:p.Thr788Ser
XR_001738747.2:n.2424A>T
XR_939685.2:n.2424A>T
NM_000251.3:c.2362A>T MANE Select	NP_000242.1:p.Thr788Ser