Canonical Allele Identifier: CA340172305

Gene: POMGNT1 TSPAN1

Linked Data

• MyVariant Identifiers: chr1:g.46656393T>G (hg19) ; chr1:g.46190721T>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46190721T>G , CM000663.2:g.46190721T>G	GRCh38
NC_000001.10:g.46656393T>G , CM000663.1:g.46656393T>G	GRCh37
NC_000001.9:g.46428980T>G	NCBI36
NG_009205.2:g.34585A>C
NG_009205.3:g.34585A>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1603A>C (POMGNT1)	ENSP00000379698.4:p.Ser535Arg
ENST00000477114.2:n.2165A>C (POMGNT1)
ENST00000497439.6:n.1775A>C (POMGNT1)
ENST00000684817.1:n.1963A>C (POMGNT1)
ENST00000684898.1:n.2165A>C (POMGNT1)
ENST00000685230.1:c.*913A>C (POMGNT1)	ENSP00000510305.1:n.*913A>C
ENST00000685275.1:n.2150A>C (POMGNT1)
ENST00000685444.1:c.1504A>C (POMGNT1)	ENSP00000510762.1:p.Ser502Arg
ENST00000685704.1:n.2165A>C (POMGNT1)
ENST00000685775.1:n.4443A>C (POMGNT1)
ENST00000685833.1:n.3794A>C (POMGNT1)
ENST00000686252.1:n.2677A>C (POMGNT1)
ENST00000686379.1:c.*727A>C (POMGNT1)	ENSP00000508913.1:n.*727A>C
ENST00000686724.1:n.3088A>C (POMGNT1)
ENST00000686737.1:c.1603A>C (POMGNT1)	ENSP00000508736.1:p.Ser535Arg
ENST00000687112.1:n.2469A>C (POMGNT1)
ENST00000687149.1:c.1540-100A>C (POMGNT1)	ENSP00000509745.1:n.1540-100A>C
ENST00000687197.1:c.*543A>C (POMGNT1)	ENSP00000510749.1:n.*543A>C
ENST00000687235.1:n.3478A>C (POMGNT1)
ENST00000687613.1:n.2290-732A>C (POMGNT1)
ENST00000687683.1:c.1603A>C (POMGNT1)	ENSP00000508522.1:p.Ser535Arg
ENST00000688032.1:n.2141+24A>C (POMGNT1)
ENST00000688596.1:n.2254A>C (POMGNT1)
ENST00000688608.1:c.1504A>C (POMGNT1)	ENSP00000508890.1:p.Ser502Arg
ENST00000688919.1:n.2799A>C (POMGNT1)
ENST00000689031.1:n.2102-732A>C (POMGNT1)
ENST00000689717.1:n.1775A>C (POMGNT1)
ENST00000689756.1:c.*1235A>C (POMGNT1)	ENSP00000509023.1:n.*1235A>C
ENST00000690377.1:n.1950A>C (POMGNT1)
ENST00000690678.1:c.1603A>C (POMGNT1)	ENSP00000508703.1:p.Ser535Arg
ENST00000691209.1:c.*543A>C (POMGNT1)	ENSP00000510112.1:n.*543A>C
ENST00000691243.1:c.1579+24A>C (POMGNT1)	ENSP00000510654.1:n.1579+24A>C
ENST00000692169.1:n.3065A>C (POMGNT1)
ENST00000692202.1:n.2178A>C (POMGNT1)
ENST00000692322.1:c.*1392-204A>C (POMGNT1)	ENSP00000509017.1:n.*1392-204A>C
ENST00000692369.1:c.1603A>C (POMGNT1)	ENSP00000508453.1:p.Ser535Arg
ENST00000692599.1:n.3478A>C (POMGNT1)
ENST00000692635.1:c.*480-204A>C (POMGNT1)	ENSP00000508425.1:n.*480-204A>C
ENST00000693168.1:n.3177A>C (POMGNT1)
ENST00000693218.1:c.1603A>C (POMGNT1)	ENSP00000510577.1:p.Arg535=
ENST00000693223.1:n.2551A>C (POMGNT1)
ENST00000693365.1:n.5550A>C (POMGNT1)
ENST00000371984.8:c.1603A>C (POMGNT1) MANE Select	ENSP00000361052.3:p.Ser535Arg
ENST00000371984.7:c.1603A>C (POMGNT1)	ENSP00000361052.3:p.Ser535Arg
ENST00000371992.1:c.1603A>C (POMGNT1)	ENSP00000361060.1:p.Ser535Arg
ENST00000396420.7:c.*1272A>C (POMGNT1)	ENSP00000379698.3:n.*1272A>C
ENST00000480972.1:n.252A>C (POMGNT1)
ENST00000485714.1:n.2302A>C (POMGNT1)
NM_001243766.1:c.1603A>C (POMGNT1)	NP_001230695.1:p.Ser535Arg
NM_001290129.1:c.1537A>C (POMGNT1)	NP_001277058.1:p.Ser513Arg
NM_001290130.1:c.1174A>C (POMGNT1)	NP_001277059.1:p.Ser392Arg
NM_017739.3:c.1603A>C (POMGNT1)	NP_060209.3:p.Ser535Arg
XM_005271010.1:c.1603A>C (POMGNT1)	XP_005271067.1:p.Ser535Arg
XM_006710755.1:c.1603A>C (POMGNT1)	XP_006710818.1:p.Ser535Arg
XM_006710756.1:c.1603A>C (POMGNT1)	XP_006710819.1:p.Ser535Arg
XM_011540460.1:c.678+5413T>G (TSPAN1)	XP_011538762.1:n.678+5413T>G
XM_011540461.1:c.633+5413T>G (TSPAN1)	XP_011538763.1:n.633+5413T>G
XM_011541759.1:c.1537A>C (POMGNT1)	XP_011540061.1:p.Ser513Arg
XM_011541760.1:c.1537A>C (POMGNT1)	XP_011540062.1:p.Ser513Arg
XM_011541761.1:c.511A>C (POMGNT1)	XP_011540063.1:p.Ser171Arg
XM_011540460.3:c.678+5413T>G (TSPAN1)	XP_011538762.1:n.678+5413T>G
XM_011541760.3:c.1537A>C (POMGNT1)	XP_011540062.1:p.Ser513Arg
XM_017001690.1:c.1603A>C (POMGNT1)	XP_016857179.1:p.Ser535Arg
NM_001243766.2:c.1603A>C (POMGNT1)	NP_001230695.2:p.Ser535Arg
NM_001290129.2:c.1537A>C (POMGNT1)	NP_001277058.2:p.Ser513Arg
NM_001290130.2:c.1174A>C (POMGNT1)	NP_001277059.2:p.Ser392Arg
NM_017739.4:c.1603A>C (POMGNT1) MANE Select	NP_060209.4:p.Ser535Arg