Canonical Allele Identifier: CA068241
Gene: MSH6 HGNC NCBI

Linked Data

ClinVar Variation Id: 220796
dbSNP Id: rs763702846
gnomAD v2: 2-48010559-T-C
gnomAD v3: 2-47783420-T-C
gnomAD v4: 2-47783420-T-C

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47783420T>C , CM000664.2:g.47783420T>C GRCh38
NC_000002.11:g.48010559T>C , CM000664.1:g.48010559T>C GRCh37
NC_000002.10:g.47864063T>C NCBI36
NG_007111.1:g.5274T>C , LRG_219:g.5274T>C

Transcript Alleles

HGVS Amino-acid Change
ENST00000700004.2:c.187T>C ENSP00000514752.2:p.Ser63Pro
ENST00000699999.1:n.271T>C
ENST00000700000.1:c.187T>C ENSP00000514749.1:p.Ser63Pro
ENST00000700001.1:n.259T>C
ENST00000700002.1:c.187T>C ENSP00000514750.1:p.Ser63Pro
ENST00000700003.1:c.187T>C ENSP00000514751.1:p.Ser63Pro
ENST00000234420.11:c.187T>C MANE Select ENSP00000234420.5:p.Ser63Pro
ENST00000540021.6:c.187T>C ENSP00000446475.1:p.Ser63Pro
ENST00000652107.1:c.-37-7507T>C ENSP00000498629.1:n.-37-7507T>C
ENST00000673637.1:c.-38+189T>C ENSP00000501310.1:n.-38+189T>C
ENST00000673922.1:n.276T>C
ENST00000234420.9:c.187T>C ENSP00000234420.4:p.Ser63Pro
ENST00000445503.5:c.187T>C ENSP00000405294.1:p.Ser63Pro
ENST00000456246.1:c.187T>C ENSP00000410570.1:p.Ser63Pro
ENST00000493177.1:n.251T>C
ENST00000540021.5:c.187T>C ENSP00000446475.1:p.Ser63Pro
ENST00000606499.1:c.-37-7507T>C ENSP00000475605.1:n.-37-7507T>C
ENST00000614496.4:c.-550T>C ENSP00000477844.1:n.-550T>C
ENST00000616033.4:c.184T>C ENSP00000480261.1:p.Ser62Pro
ENST00000622629.4:c.-2910T>C ENSP00000482078.1:n.-2910T>C
NM_000179.2:c.187T>C , LRG_219t1:c.187T>C NP_000170.1:p.Ser63Pro
NM_001281492.1:c.187T>C NP_001268421.1:p.Ser63Pro
NM_001281493.1:c.-550T>C NP_001268422.1:n.-550T>C
XM_011532800.1:c.-38+189T>C XP_011531102.1:n.-38+189T>C
XM_024452819.1:c.187T>C XP_024308587.1:p.Ser63Pro
XM_024452822.1:c.-550T>C XP_024308590.1:n.-550T>C
NM_000179.3:c.187T>C MANE Select NP_000170.1:p.Ser63Pro
NM_001281492.2:c.187T>C NP_001268421.1:p.Ser63Pro
NM_001281493.2:c.-550T>C NP_001268422.1:n.-550T>C