Canonical Allele Identifier: CA020747

Gene: MSH2

Linked Data

• ClinVar Variation Id: 91003
• ClinVar RCV Id: RCV000662430 ; RCV000692140 ; RCV000774582 ; RCV001818241
• dbSNP Id: rs587779150
• ExAC: 2:47707943 A / G
• gnomAD v2: 2-47707943-A-G
• gnomAD v4: 2-47480804-A-G
• MyVariant Identifiers: chr2:g.47707943A>G (hg19) ; chr2:g.47480804A>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47480804A>G , CM000664.2:g.47480804A>G	GRCh38
NC_000002.11:g.47707943A>G , CM000664.1:g.47707943A>G	GRCh37
NC_000002.10:g.47561447A>G	NCBI36
NG_007110.2:g.82681A>G , LRG_218:g.82681A>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.2567A>G	ENSP00000495641.2:p.Tyr856Cys
ENST00000233146.7:c.2567A>G MANE Select	ENSP00000233146.2:p.Tyr856Cys
ENST00000543555.6:c.2369A>G	ENSP00000442697.1:p.Tyr790Cys
ENST00000644092.1:c.*867A>G	ENSP00000496351.1:n.*867A>G
ENST00000644900.1:c.420A>G
ENST00000645339.1:c.2567A>G	ENSP00000496441.1:p.Tyr856Cys
ENST00000645506.1:c.2567A>G	ENSP00000495455.1:p.Tyr856Cys
ENST00000646415.1:c.2567A>G	ENSP00000495543.1:p.Tyr856Cys
ENST00000233146.6:c.2567A>G	ENSP00000233146.2:p.Tyr856Cys
ENST00000406134.5:c.2567A>G	ENSP00000384199.1:p.Tyr856Cys
ENST00000461394.5:n.8A>G
ENST00000543555.5:c.2369A>G	ENSP00000442697.1:p.Tyr790Cys
ENST00000610696.4:c.*963A>G	ENSP00000483159.1:n.*963A>G
ENST00000613514.4:c.*1107A>G	ENSP00000484137.1:n.*1107A>G
ENST00000617333.3:c.*1333A>G	ENSP00000482468.1:n.*1333A>G
ENST00000617938.4:c.*1539A>G	ENSP00000481158.1:n.*1539A>G
ENST00000621359.2:c.*133A>G	ENSP00000481416.1:n.*133A>G
NM_000251.2:c.2567A>G , LRG_218t1:c.2567A>G	NP_000242.1:p.Tyr856Cys
NM_001258281.1:c.2369A>G	NP_001245210.1:p.Tyr790Cys
XM_005264332.2:c.2567A>G	XP_005264389.2:p.Tyr856Cys
XM_011532867.1:c.2567A>G	XP_011531169.1:p.Tyr856Cys
XR_939685.1:n.2639A>G
XM_005264332.4:c.2567A>G	XP_005264389.2:p.Tyr856Cys
XM_011532867.2:c.2567A>G	XP_011531169.1:p.Tyr856Cys
XR_001738747.2:n.2629A>G
XR_939685.2:n.2629A>G
NM_000251.3:c.2567A>G MANE Select	NP_000242.1:p.Tyr856Cys