Canonical Allele Identifier: CA019984

Gene: MSH2

Linked Data

• ClinVar Variation Id: 90882
• ClinVar RCV Id: RCV000076384 ; RCV002415564 ; RCV002228184 ; RCV004537293
• dbSNP Id: rs63750961
• MyVariant Identifiers: chr2:g.47703589T>C (hg19) ; chr2:g.47476450T>C (hg38)
• PubMed: PMID:10480359 ; PMID:12377806 ; PMID:16395668 ; PMID:17720936 ; PMID:18383312

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47476450T>C , CM000664.2:g.47476450T>C	GRCh38
NC_000002.11:g.47703589T>C , CM000664.1:g.47703589T>C	GRCh37
NC_000002.10:g.47557093T>C	NCBI36
NG_007110.2:g.78327T>C , LRG_218:g.78327T>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.2089T>C	ENSP00000495641.2:p.Cys697Arg
ENST00000233146.7:c.2089T>C MANE Select	ENSP00000233146.2:p.Cys697Arg
ENST00000543555.6:c.1891T>C	ENSP00000442697.1:p.Cys631Arg
ENST00000644092.1:c.*389T>C	ENSP00000496351.1:n.*389T>C
ENST00000645339.1:c.2089T>C	ENSP00000496441.1:p.Cys697Arg
ENST00000645506.1:c.2089T>C	ENSP00000495455.1:p.Cys697Arg
ENST00000646415.1:c.2089T>C	ENSP00000495543.1:p.Cys697Arg
ENST00000233146.6:c.2089T>C	ENSP00000233146.2:p.Cys697Arg
ENST00000406134.5:c.2089T>C	ENSP00000384199.1:p.Cys697Arg
ENST00000543555.5:c.1891T>C	ENSP00000442697.1:p.Cys631Arg
ENST00000610696.4:c.*485T>C	ENSP00000483159.1:n.*485T>C
ENST00000613514.4:c.*629T>C	ENSP00000484137.1:n.*629T>C
ENST00000617333.3:c.*855T>C	ENSP00000482468.1:n.*855T>C
ENST00000617938.4:c.*1061T>C	ENSP00000481158.1:n.*1061T>C
ENST00000621359.2:c.2089T>C	ENSP00000481416.1:p.Cys697Arg
NM_000251.2:c.2089T>C , LRG_218t1:c.2089T>C	NP_000242.1:p.Cys697Arg
NM_001258281.1:c.1891T>C	NP_001245210.1:p.Cys631Arg
XM_005264332.2:c.2089T>C	XP_005264389.2:p.Cys697Arg
XM_011532867.1:c.2089T>C	XP_011531169.1:p.Cys697Arg
XR_939685.1:n.2161T>C
XM_005264332.4:c.2089T>C	XP_005264389.2:p.Cys697Arg
XM_011532867.2:c.2089T>C	XP_011531169.1:p.Cys697Arg
XR_001738747.2:n.2151T>C
XR_939685.2:n.2151T>C
NM_000251.3:c.2089T>C MANE Select	NP_000242.1:p.Cys697Arg