Canonical Allele Identifier: CA014629
Gene: TSC2 HGNC NCBI

Linked Data

ClinVar Variation Id: 49660
dbSNP Id: rs137854154
gnomAD v2: 16-2112989-G-A
gnomAD v3: 16-2062988-G-A
gnomAD v4: 16-2062988-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000016.10:g.2062988G>A , CM000678.2:g.2062988G>A GRCh38
NC_000016.9:g.2112989G>A , CM000678.1:g.2112989G>A GRCh37
NC_000016.8:g.2052990G>A NCBI36
NG_005895.1:g.18683G>A , LRG_487:g.18683G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000568566.6:c.1361+388G>A ENSP00000455997.2:n.1361+388G>A
ENST00000642206.2:c.1423G>A ENSP00000495146.2:p.Ala475Thr
ENST00000642365.2:c.1378G>A ENSP00000495459.2:p.Ala460Thr
ENST00000644417.2:c.*815G>A ENSP00000493912.2:n.*815G>A
ENST00000646464.2:c.*983G>A ENSP00000496610.2:n.*983G>A
ENST00000219476.9:c.1378G>A MANE Select ENSP00000219476.3:p.Ala460Thr
ENST00000350773.9:c.1378G>A ENSP00000344383.4:p.Ala460Thr
ENST00000401874.7:c.1378G>A ENSP00000384468.2:p.Ala460Thr
ENST00000463601.2:n.288G>A
ENST00000467949.2:n.548G>A
ENST00000568454.6:c.1411G>A ENSP00000454487.1:p.Ala471Thr
ENST00000642365.1:c.35G>A
ENST00000642561.1:c.1378G>A ENSP00000495099.1:p.Ala460Thr
ENST00000642797.1:c.1378G>A ENSP00000493846.1:p.Ala460Thr
ENST00000642812.1:n.1423G>A
ENST00000642936.1:c.1378G>A ENSP00000494514.1:p.Ala460Thr
ENST00000643088.1:c.1378G>A ENSP00000494747.1:p.Ala460Thr
ENST00000643149.1:n.3388G>A
ENST00000643298.1:c.*880G>A ENSP00000494393.1:n.*880G>A
ENST00000643745.1:c.*310G>A ENSP00000495948.1:n.*310G>A
ENST00000643946.1:c.1378G>A ENSP00000495927.1:p.Ala460Thr
ENST00000644043.1:c.1378G>A ENSP00000496262.1:p.Ala460Thr
ENST00000644135.1:c.1378G>A ENSP00000495644.1:p.Ala460Thr
ENST00000644222.1:n.1465G>A
ENST00000644329.1:c.1378G>A ENSP00000496611.1:p.Ala460Thr
ENST00000644335.1:c.1378G>A ENSP00000496317.1:p.Ala460Thr
ENST00000644399.1:c.1371G>A
ENST00000644665.1:n.2552G>A
ENST00000644847.1:n.370G>A
ENST00000645591.1:n.2436G>A
ENST00000646388.1:c.1378G>A ENSP00000495921.1:p.Ala460Thr
ENST00000646634.1:n.391G>A
ENST00000647234.1:n.3136G>A
ENST00000647242.1:n.2014G>A
ENST00000219476.7:c.1378G>A ENSP00000219476.3:p.Ala460Thr
ENST00000350773.8:c.1378G>A ENSP00000344383.4:p.Ala460Thr
ENST00000382538.10:c.1231G>A ENSP00000371978.6:p.Ala411Thr
ENST00000401874.6:c.1378G>A ENSP00000384468.2:p.Ala460Thr
ENST00000439117.6:c.*677G>A ENSP00000406980.2:n.*677G>A
ENST00000439673.6:c.1267G>A ENSP00000399232.2:p.Ala423Thr
ENST00000463601.1:n.541G>A
ENST00000467949.1:c.532G>A ENSP00000454997.1:p.Ala178Thr
ENST00000490108.1:n.151G>A
ENST00000568454.5:c.1411G>A ENSP00000454487.1:p.Ala471Thr
ENST00000568566.5:c.83+388G>A ENSP00000455997.1:n.83+388G>A
NM_000548.3:c.1378G>A , LRG_487t1:c.1378G>A NP_000539.2:p.Ala460Thr
NM_001077183.1:c.1378G>A NP_001070651.1:p.Ala460Thr
NM_001114382.1:c.1378G>A NP_001107854.1:p.Ala460Thr
XM_005255529.3:c.1378G>A XP_005255586.2:p.Ala460Thr
XM_005255531.3:c.1378G>A XP_005255588.2:p.Ala460Thr
XM_011522636.1:c.1378G>A XP_011520938.1:p.Ala460Thr
XM_011522637.1:c.1378G>A XP_011520939.1:p.Ala460Thr
XM_011522638.1:c.1267G>A XP_011520940.1:p.Ala423Thr
XM_011522639.1:c.1378G>A XP_011520941.1:p.Ala460Thr
XM_011522640.1:c.1378G>A XP_011520942.1:p.Ala460Thr
XM_011522641.1:c.1267G>A XP_011520943.1:p.Ala423Thr
NM_000548.4:c.1378G>A NP_000539.2:p.Ala460Thr
NM_001077183.2:c.1378G>A NP_001070651.1:p.Ala460Thr
NM_001114382.2:c.1378G>A NP_001107854.1:p.Ala460Thr
NM_001318827.1:c.1267G>A NP_001305756.1:p.Ala423Thr
NM_001318829.1:c.1231G>A NP_001305758.1:p.Ala411Thr
NM_001318831.1:c.778G>A NP_001305760.1:p.Ala260Thr
NM_001318832.1:c.1411G>A NP_001305761.1:p.Ala471Thr
NM_001363528.1:c.1378G>A NP_001350457.1:p.Ala460Thr
NM_021055.2:c.1378G>A NP_066399.2:p.Ala460Thr
XM_005255531.4:c.1378G>A XP_005255588.2:p.Ala460Thr
XM_011522636.2:c.1378G>A XP_011520938.1:p.Ala460Thr
XM_011522637.2:c.1378G>A XP_011520939.1:p.Ala460Thr
XM_011522638.2:c.1540G>A XP_011520940.2:p.Ala514Thr
XM_011522639.2:c.1378G>A XP_011520941.1:p.Ala460Thr
XM_011522640.2:c.1378G>A XP_011520942.1:p.Ala460Thr
XM_017023615.1:c.1378G>A XP_016879104.1:p.Ala460Thr
XM_017023616.1:c.1378G>A XP_016879105.1:p.Ala460Thr
XM_017023617.1:c.1540G>A XP_016879106.1:p.Ala514Thr
XM_017023618.1:c.34G>A XP_016879107.1:p.Ala12Thr
XM_024450413.1:c.1378G>A XP_024306181.1:p.Ala460Thr
NM_000548.5:c.1378G>A MANE Select NP_000539.2:p.Ala460Thr
NM_001370404.1:c.1378G>A NP_001357333.1:p.Ala460Thr
NM_001370405.1:c.1378G>A NP_001357334.1:p.Ala460Thr
NM_001077183.3:c.1378G>A NP_001070651.1:p.Ala460Thr
NM_001114382.3:c.1378G>A NP_001107854.1:p.Ala460Thr
NM_001318827.2:c.1267G>A NP_001305756.1:p.Ala423Thr
NM_001318829.2:c.1231G>A NP_001305758.1:p.Ala411Thr
NM_001318831.2:c.778G>A NP_001305760.1:p.Ala260Thr
NM_001318832.2:c.1411G>A NP_001305761.1:p.Ala471Thr
NM_001363528.2:c.1378G>A NP_001350457.1:p.Ala460Thr
NM_021055.3:c.1378G>A NP_066399.2:p.Ala460Thr