Linked Data
ClinVar Variation Id:
89464
dbSNP Id:
rs3136365
ExAC:
2:48033514 T / C
gnomAD v2:
2-48033514-T-C
gnomAD v3:
2-47806375-T-C
gnomAD v4:
2-47806375-T-C
PubMed:
PMID:10537275
Genomic Alleles
| HGVS | Genome Assembly |
|---|---|
| NC_000002.12:g.47806375T>C , CM000664.2:g.47806375T>C | GRCh38 |
| NC_000002.11:g.48033514T>C , CM000664.1:g.48033514T>C | GRCh37 |
| NC_000002.10:g.47887018T>C | NCBI36 |
| NG_007111.1:g.28229T>C , LRG_219:g.28229T>C | |
| NG_008397.1:g.104301A>G |
Transcript Alleles
| HGVS | Amino-acid Change | |
|---|---|---|
| ENST00000411819.2:c.3504+17T>C (MSH6) | ENSP00000406248.2:n.3504+17T>C | |
| ENST00000420813.6:c.3504+17T>C (MSH6) | ENSP00000390382.2:n.3504+17T>C | |
| ENST00000455383.6:c.3504+17T>C (MSH6) | ENSP00000397484.2:n.3504+17T>C | |
| ENST00000700004.2:c.3417+17T>C (MSH6) | ENSP00000514752.2:n.3417+17T>C | |
| ENST00000699999.1:n.4475+17T>C (MSH6) | ||
| ENST00000700000.1:c.2235+17T>C (MSH6) | ENSP00000514749.1:n.2235+17T>C | |
| ENST00000700002.1:c.3807+17T>C (MSH6) | ENSP00000514750.1:n.3807+17T>C | |
| ENST00000700003.1:c.1256+17T>C (MSH6) | ENSP00000514751.1:n.1256+17T>C | |
| ENST00000700004.1:c.2574+17T>C (MSH6) | ENSP00000514752.1:n.2574+17T>C | |
| ENST00000700005.1:n.2652+17T>C (MSH6) | ||
| ENST00000700006.1:n.4959+17T>C (MSH6) | ||
| ENST00000700007.1:n.2396+17T>C (MSH6) | ||
| ENST00000700008.1:n.1987T>C (MSH6) | ||
| ENST00000700009.1:n.2465+17T>C (MSH6) | ||
| ENST00000700010.1:n.1210+17T>C (MSH6) | ||
| ENST00000700011.1:n.3095+17T>C (MSH6) | ||
| ENST00000682451.1:n.4373A>G (FBXO11) | ||
| ENST00000684712.1:n.4635A>G (FBXO11) | ||
| ENST00000234420.11:c.3801+17T>C (MSH6) MANE Select | ENSP00000234420.5:n.3801+17T>C | |
| ENST00000540021.6:c.3411+17T>C (MSH6) | ENSP00000446475.1:n.3411+17T>C | |
| ENST00000652107.1:c.3504+17T>C (MSH6) | ENSP00000498629.1:n.3504+17T>C | |
| ENST00000673637.1:c.3504+17T>C (MSH6) | ENSP00000501310.1:n.3504+17T>C | |
| ENST00000234420.9:c.3801+17T>C (MSH6) | ENSP00000234420.4:n.3801+17T>C | |
| ENST00000405808.5:c.169+1820A>G (FBXO11) | ENSP00000385127.1:n.169+1820A>G | |
| ENST00000434234.5:c.*124+1619A>G (FBXO11) | ENSP00000402692.1:n.*124+1619A>G | |
| ENST00000445503.5:c.*3148+17T>C (MSH6) | ENSP00000405294.1:n.*3148+17T>C | |
| ENST00000538136.1:c.2895+17T>C (MSH6) | ENSP00000438580.1:n.2895+17T>C | |
| ENST00000540021.5:c.3411+17T>C (MSH6) | ENSP00000446475.1:n.3411+17T>C | |
| ENST00000614496.4:c.2895+17T>C (MSH6) | ENSP00000477844.1:n.2895+17T>C | |
| ENST00000622629.4:c.702+17T>C (MSH6) | ENSP00000482078.1:n.702+17T>C | |
| NM_000179.2:c.3801+17T>C , LRG_219t1:c.3801+17T>C (MSH6) | NP_000170.1:n.3801+17T>C | |
| NM_001281492.1:c.3411+17T>C (MSH6) | NP_001268421.1:n.3411+17T>C | |
| NM_001281493.1:c.2895+17T>C (MSH6) | NP_001268422.1:n.2895+17T>C | |
| NM_001281494.1:c.2895+17T>C (MSH6) | NP_001268423.1:n.2895+17T>C | |
| XM_005264271.1:c.3504+17T>C (MSH6) | XP_005264328.1:n.3504+17T>C | |
| XM_011532798.1:c.3618+17T>C (MSH6) | XP_011531100.1:n.3618+17T>C | |
| XM_011532799.1:c.3504+17T>C (MSH6) | XP_011531101.1:n.3504+17T>C | |
| XM_011532800.1:c.3504+17T>C (MSH6) | XP_011531102.1:n.3504+17T>C | |
| XM_024452819.1:c.3818T>C (MSH6) | XP_024308587.1:p.Phe1273Ser | |
| XM_024452820.1:c.3635T>C (MSH6) | XP_024308588.1:p.Phe1212Ser | |
| XM_024452821.1:c.3521T>C (MSH6) | XP_024308589.1:p.Phe1174Ser | |
| XM_024452822.1:c.2912T>C (MSH6) | XP_024308590.1:p.Phe971Ser | |
| NM_000179.3:c.3801+17T>C (MSH6) MANE Select | NP_000170.1:n.3801+17T>C | |
| NM_001281492.2:c.3411+17T>C (MSH6) | NP_001268421.1:n.3411+17T>C | |
| NM_001281493.2:c.2895+17T>C (MSH6) | NP_001268422.1:n.2895+17T>C | |
| NM_001281494.2:c.2895+17T>C (MSH6) | NP_001268423.1:n.2895+17T>C |