Canonical Allele Identifier: CA009702

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 89254
• ClinVar RCV Id: RCV000074718 ; RCV001530136 ; RCV003137606 ; RCV001854277 ; RCV003584540
• dbSNP Id: rs587779231
• gnomAD v4: 2-47800100-T-C
• MyVariant Identifiers: chr2:g.48027239T>C (hg19) ; chr2:g.47800100T>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47800100T>C , CM000664.2:g.47800100T>C	GRCh38
NC_000002.11:g.48027239T>C , CM000664.1:g.48027239T>C	GRCh37
NC_000002.10:g.47880743T>C	NCBI36
NG_007111.1:g.21954T>C , LRG_219:g.21954T>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.1820T>C (MSH6)	ENSP00000406248.2:p.Phe607Ser
ENST00000420813.6:c.1820T>C (MSH6)	ENSP00000390382.2:p.Phe607Ser
ENST00000455383.6:c.1820T>C (MSH6)	ENSP00000397484.2:p.Phe607Ser
ENST00000700004.2:c.2117T>C (MSH6)	ENSP00000514752.2:p.Phe706Ser
ENST00000699999.1:n.2201T>C (MSH6)
ENST00000700000.1:c.1606+511T>C (MSH6)	ENSP00000514749.1:n.1606+511T>C
ENST00000700002.1:c.2123T>C (MSH6)	ENSP00000514750.1:p.Phe708Ser
ENST00000700003.1:c.628-3320T>C (MSH6)	ENSP00000514751.1:n.628-3320T>C
ENST00000700004.1:c.1274T>C (MSH6)	ENSP00000514752.1:p.Phe425Ser
ENST00000234420.11:c.2117T>C (MSH6) MANE Select	ENSP00000234420.5:p.Phe706Ser
ENST00000540021.6:c.1727T>C (MSH6)	ENSP00000446475.1:p.Phe576Ser
ENST00000652107.1:c.1820T>C (MSH6)	ENSP00000498629.1:p.Phe607Ser
ENST00000673637.1:c.1820T>C (MSH6)	ENSP00000501310.1:p.Phe607Ser
ENST00000234420.9:c.2117T>C (MSH6)	ENSP00000234420.4:p.Phe706Ser
ENST00000405808.5:c.169+8095A>G (FBXO11)	ENSP00000385127.1:n.169+8095A>G
ENST00000434234.5:c.*124+7894A>G (FBXO11)	ENSP00000402692.1:n.*124+7894A>G
ENST00000445503.5:c.*1464T>C (MSH6)	ENSP00000405294.1:n.*1464T>C
ENST00000538136.1:c.1211T>C (MSH6)	ENSP00000438580.1:p.Phe404Ser
ENST00000540021.5:c.1727T>C (MSH6)	ENSP00000446475.1:p.Phe576Ser
ENST00000614496.4:c.1211T>C (MSH6)	ENSP00000477844.1:p.Phe404Ser
ENST00000616033.4:c.2114T>C (MSH6)	ENSP00000480261.1:p.Phe705Ser
ENST00000622629.4:c.-980T>C (MSH6)	ENSP00000482078.1:n.-980T>C
NM_000179.2:c.2117T>C , LRG_219t1:c.2117T>C (MSH6)	NP_000170.1:p.Phe706Ser
NM_001281492.1:c.1727T>C (MSH6)	NP_001268421.1:p.Phe576Ser
NM_001281493.1:c.1211T>C (MSH6)	NP_001268422.1:p.Phe404Ser
NM_001281494.1:c.1211T>C (MSH6)	NP_001268423.1:p.Phe404Ser
XM_005264271.1:c.1820T>C (MSH6)	XP_005264328.1:p.Phe607Ser
XM_011532798.1:c.1934T>C (MSH6)	XP_011531100.1:p.Phe645Ser
XM_011532799.1:c.1820T>C (MSH6)	XP_011531101.1:p.Phe607Ser
XM_011532800.1:c.1820T>C (MSH6)	XP_011531102.1:p.Phe607Ser
XM_024452819.1:c.2117T>C (MSH6)	XP_024308587.1:p.Phe706Ser
XM_024452820.1:c.1934T>C (MSH6)	XP_024308588.1:p.Phe645Ser
XM_024452821.1:c.1820T>C (MSH6)	XP_024308589.1:p.Phe607Ser
XM_024452822.1:c.1211T>C (MSH6)	XP_024308590.1:p.Phe404Ser
NM_000179.3:c.2117T>C (MSH6) MANE Select	NP_000170.1:p.Phe706Ser
NM_001281492.2:c.1727T>C (MSH6)	NP_001268421.1:p.Phe576Ser
NM_001281493.2:c.1211T>C (MSH6)	NP_001268422.1:p.Phe404Ser
NM_001281494.2:c.1211T>C (MSH6)	NP_001268423.1:p.Phe404Ser