{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA9443909",
  "communityStandardTitle": [
    "NM_181882.3(PRX):c.3186G>T (p.Lys1062Asn)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=245131[alleleid]",
        "alleleId": 245131,
        "preferredName": "NM_181882.3(PRX):c.3186G>T (p.Lys1062Asn)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/245910",
        "RCV": [
          "RCV000474498",
          "RCV000766571",
          "RCV001131681",
          "RCV001172762",
          "RCV001283504",
          "RCV001814975",
          "RCV002321902"
        ],
        "variationId": 245910
      }
    ],
    "ExAC": [
      {
        "@id": "http://exac.broadinstitute.org/variant/19-40901073-C-A",
        "id": "19-40901073-C-A",
        "variant": "19:40901073 C / A"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr19:g.40901073C>A?assembly=hg19",
        "id": "chr19:g.40901073C>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr19:g.40395166C>A?assembly=hg38",
        "id": "chr19:g.40395166C>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/139188673",
        "rs": 139188673
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40901073-C-A?dataset=gnomad_r2_1",
        "id": "19-40901073-C-A",
        "variant": "19:40901073 C / A"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40395166-C-A?dataset=gnomad_r3",
        "id": "19-40395166-C-A",
        "variant": "19:40395166 C / A"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40395166-C-A?dataset=gnomad_r4",
        "id": "19-40395166-C-A",
        "variant": "19:40395166 C / A"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "A",
          "end": 40395166,
          "referenceAllele": "C",
          "start": 40395165
        }
      ],
      "hgvs": [
        "NC_000019.10:g.40395166C>A",
        "CM000681.2:g.40395166C>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000067"
    },
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "A",
          "end": 40901073,
          "referenceAllele": "C",
          "start": 40901072
        }
      ],
      "hgvs": [
        "NC_000019.9:g.40901073C>A",
        "CM000681.1:g.40901073C>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000043"
    },
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "A",
          "end": 45592913,
          "referenceAllele": "C",
          "start": 45592912
        }
      ],
      "hgvs": [
        "NC_000019.8:g.45592913C>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000019"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 23199,
          "referenceAllele": "G",
          "start": 23198
        }
      ],
      "hgvs": [
        "NG_007979.1:g.23199G>T",
        "LRG_265:g.23199G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS000747"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 56,
          "referenceAllele": "G",
          "start": 55
        }
      ],
      "hgvs": [
        "NG_051224.1:g.56G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS616912"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3469,
          "referenceAllele": "G",
          "start": 3468
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000324001.8:c.3186G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000326018.6:p.Lys1062Asn",
        "hgvsWellDefined": "ENSP00000326018.6:p.Lys1062Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS746601",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000324001.8:c.3186G>T"
          },
          "RefSeq": {
            "hgvs": "NM_181882.3:c.3186G>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000326018.6:p.Lys1062Asn"
          },
          "RefSeq": {
            "hgvs": "NP_870998.2:p.Lys1062Asn"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3585,
          "referenceAllele": "G",
          "start": 3584
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000673881.1:c.2769G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000501070.1:p.Lys923Asn",
        "hgvsWellDefined": "ENSP00000501070.1:p.Lys923Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS773939"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3522,
          "referenceAllele": "G",
          "start": 3521
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000674005.2:c.3471G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000501261.1:p.Lys1157Asn",
        "hgvsWellDefined": "ENSP00000501261.1:p.Lys1157Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS774039"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3035,
          "referenceAllele": "G",
          "start": 3034
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000674773.1:c.2769G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000502579.1:p.Lys923Asn",
        "hgvsWellDefined": "ENSP00000502579.1:p.Lys923Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS774689"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3061,
          "referenceAllele": "G",
          "start": 3060
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000675517.1:c.3061G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775326"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3047,
          "referenceAllele": "G",
          "start": 3046
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676076.1:c.3047G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775811"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3148,
          "referenceAllele": "G",
          "start": 3147
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676260.1:c.3148G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775970"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3073,
          "referenceAllele": "G",
          "start": 3072
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676316.1:c.3073G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS776013"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 4104,
          "referenceAllele": "G",
          "start": 4103
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000291825.11:c.*3391G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000291825.6:n.*3391G>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS253765"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3457,
          "referenceAllele": "G",
          "start": 3456
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000324001.7:c.3186G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000326018.6:p.Lys1062Asn",
        "hgvsWellDefined": "ENSP00000326018.6:p.Lys1062Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS258283"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 4104,
          "referenceAllele": "G",
          "start": 4103
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_020956.2:c.*3391G>T",
        "LRG_265t1:c.*3391G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_066007.1:n.*3391G>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS036720"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645374520",
      "coordinates": [
        {
          "allele": "T",
          "end": 3455,
          "referenceAllele": "G",
          "start": 3454
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_181882.2:c.3186G>T",
        "LRG_265t2:c.3186G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_870998.2:p.Lys1062Asn",
        "hgvsWellDefined": "NP_870998.2:p.Lys1062Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS043920"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3447,
          "referenceAllele": "G",
          "start": 3446
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_011527171.1:c.3186G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011525473.1:p.Lys1062Asn",
        "hgvsWellDefined": "XP_011525473.1:p.Lys1062Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS094265"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3447,
          "referenceAllele": "G",
          "start": 3446
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_011527171.2:c.3186G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011525473.1:p.Lys1062Asn",
        "hgvsWellDefined": "XP_011525473.1:p.Lys1062Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS548559"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3606,
          "referenceAllele": "G",
          "start": 3605
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_017027046.1:c.3084G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016882535.1:p.Lys1028Asn",
        "hgvsWellDefined": "XP_016882535.1:p.Lys1028Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS577044"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3149,
          "referenceAllele": "G",
          "start": 3148
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_017027047.1:c.3084G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016882536.1:p.Lys1028Asn",
        "hgvsWellDefined": "XP_016882536.1:p.Lys1028Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS577045"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645374520",
      "coordinates": [
        {
          "allele": "T",
          "end": 3469,
          "referenceAllele": "G",
          "start": 3468
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_181882.3:c.3186G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_870998.2:p.Lys1062Asn",
        "hgvsWellDefined": "NP_870998.2:p.Lys1062Asn"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS701039",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000324001.8:c.3186G>T"
          },
          "RefSeq": {
            "hgvs": "NM_181882.3:c.3186G>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000326018.6:p.Lys1062Asn"
          },
          "RefSeq": {
            "hgvs": "NP_870998.2:p.Lys1062Asn"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}