{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA9443872",
  "communityStandardTitle": [
    "NM_181882.3(PRX):c.3373G>A (p.Gly1125Ser)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=245130[alleleid]",
        "alleleId": 245130,
        "preferredName": "NM_181882.3(PRX):c.3373G>A (p.Gly1125Ser)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/245663",
        "RCV": [
          "RCV000235608",
          "RCV001172782",
          "RCV000658835",
          "RCV001085498",
          "RCV001128999",
          "RCV001358805",
          "RCV002450720"
        ],
        "variationId": 245663
      }
    ],
    "ExAC": [
      {
        "@id": "http://exac.broadinstitute.org/variant/19-40900886-C-T",
        "id": "19-40900886-C-T",
        "variant": "19:40900886 C / T"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr19:g.40900886C>T?assembly=hg19",
        "id": "chr19:g.40900886C>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr19:g.40394979C>T?assembly=hg38",
        "id": "chr19:g.40394979C>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/148939995",
        "rs": 148939995
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40900886-C-T?dataset=gnomad_r2_1",
        "id": "19-40900886-C-T",
        "variant": "19:40900886 C / T"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40394979-C-T?dataset=gnomad_r3",
        "id": "19-40394979-C-T",
        "variant": "19:40394979 C / T"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40394979-C-T?dataset=gnomad_r4",
        "id": "19-40394979-C-T",
        "variant": "19:40394979 C / T"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "T",
          "end": 40394979,
          "referenceAllele": "C",
          "start": 40394978
        }
      ],
      "hgvs": [
        "NC_000019.10:g.40394979C>T",
        "CM000681.2:g.40394979C>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000067"
    },
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "T",
          "end": 40900886,
          "referenceAllele": "C",
          "start": 40900885
        }
      ],
      "hgvs": [
        "NC_000019.9:g.40900886C>T",
        "CM000681.1:g.40900886C>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000043"
    },
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "T",
          "end": 45592726,
          "referenceAllele": "C",
          "start": 45592725
        }
      ],
      "hgvs": [
        "NC_000019.8:g.45592726C>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000019"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 23386,
          "referenceAllele": "G",
          "start": 23385
        }
      ],
      "hgvs": [
        "NG_007979.1:g.23386G>A",
        "LRG_265:g.23386G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS000747"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 243,
          "referenceAllele": "G",
          "start": 242
        }
      ],
      "hgvs": [
        "NG_051224.1:g.243G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS616912"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3656,
          "referenceAllele": "G",
          "start": 3655
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000324001.8:c.3373G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000326018.6:p.Gly1125Ser",
        "hgvsWellDefined": "ENSP00000326018.6:p.Gly1125Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS746601",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000324001.8:c.3373G>A"
          },
          "RefSeq": {
            "hgvs": "NM_181882.3:c.3373G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000326018.6:p.Gly1125Ser"
          },
          "RefSeq": {
            "hgvs": "NP_870998.2:p.Gly1125Ser"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3772,
          "referenceAllele": "G",
          "start": 3771
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000673881.1:c.2956G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000501070.1:p.Gly986Ser",
        "hgvsWellDefined": "ENSP00000501070.1:p.Gly986Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS773939"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3709,
          "referenceAllele": "G",
          "start": 3708
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000674005.2:c.3658G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000501261.1:p.Gly1220Ser",
        "hgvsWellDefined": "ENSP00000501261.1:p.Gly1220Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS774039"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3222,
          "referenceAllele": "G",
          "start": 3221
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000674773.1:c.2956G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000502579.1:p.Gly986Ser",
        "hgvsWellDefined": "ENSP00000502579.1:p.Gly986Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS774689"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3248,
          "referenceAllele": "G",
          "start": 3247
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000675517.1:c.3248G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775326"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3234,
          "referenceAllele": "G",
          "start": 3233
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676076.1:c.3234G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775811"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3335,
          "referenceAllele": "G",
          "start": 3334
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676260.1:c.3335G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775970"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3260,
          "referenceAllele": "G",
          "start": 3259
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676316.1:c.3260G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS776013"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4291,
          "referenceAllele": "G",
          "start": 4290
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000291825.11:c.*3578G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000291825.6:n.*3578G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS253765"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3644,
          "referenceAllele": "G",
          "start": 3643
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000324001.7:c.3373G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000326018.6:p.Gly1125Ser",
        "hgvsWellDefined": "ENSP00000326018.6:p.Gly1125Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS258283"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4291,
          "referenceAllele": "G",
          "start": 4290
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_020956.2:c.*3578G>A",
        "LRG_265t1:c.*3578G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_066007.1:n.*3578G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS036720"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645374537",
      "coordinates": [
        {
          "allele": "A",
          "end": 3642,
          "referenceAllele": "G",
          "start": 3641
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_181882.2:c.3373G>A",
        "LRG_265t2:c.3373G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_870998.2:p.Gly1125Ser",
        "hgvsWellDefined": "NP_870998.2:p.Gly1125Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS043920"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3634,
          "referenceAllele": "G",
          "start": 3633
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_011527171.1:c.3373G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011525473.1:p.Gly1125Ser",
        "hgvsWellDefined": "XP_011525473.1:p.Gly1125Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS094265"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3634,
          "referenceAllele": "G",
          "start": 3633
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_011527171.2:c.3373G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011525473.1:p.Gly1125Ser",
        "hgvsWellDefined": "XP_011525473.1:p.Gly1125Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS548559"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3793,
          "referenceAllele": "G",
          "start": 3792
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_017027046.1:c.3271G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016882535.1:p.Gly1091Ser",
        "hgvsWellDefined": "XP_016882535.1:p.Gly1091Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS577044"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3336,
          "referenceAllele": "G",
          "start": 3335
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_017027047.1:c.3271G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016882536.1:p.Gly1091Ser",
        "hgvsWellDefined": "XP_016882536.1:p.Gly1091Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS577045"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645374537",
      "coordinates": [
        {
          "allele": "A",
          "end": 3656,
          "referenceAllele": "G",
          "start": 3655
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_181882.3:c.3373G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_870998.2:p.Gly1125Ser",
        "hgvsWellDefined": "NP_870998.2:p.Gly1125Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS701039",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000324001.8:c.3373G>A"
          },
          "RefSeq": {
            "hgvs": "NM_181882.3:c.3373G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000326018.6:p.Gly1125Ser"
          },
          "RefSeq": {
            "hgvs": "NP_870998.2:p.Gly1125Ser"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}