{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA9443813",
  "communityStandardTitle": [
    "NM_181882.3(PRX):c.3673G>A (p.Val1225Met)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=847688[alleleid]",
        "alleleId": 847688,
        "preferredName": "NM_181882.3(PRX):c.3673G>A (p.Val1225Met)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/837941",
        "RCV": [
          "RCV001135980",
          "RCV001039383"
        ],
        "variationId": 837941
      }
    ],
    "ExAC": [
      {
        "@id": "http://exac.broadinstitute.org/variant/19-40900586-C-T",
        "id": "19-40900586-C-T",
        "variant": "19:40900586 C / T"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr19:g.40900586C>T?assembly=hg19",
        "id": "chr19:g.40900586C>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr19:g.40394679C>T?assembly=hg38",
        "id": "chr19:g.40394679C>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/140880177",
        "rs": 140880177
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40900586-C-T?dataset=gnomad_r2_1",
        "id": "19-40900586-C-T",
        "variant": "19:40900586 C / T"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40394679-C-T?dataset=gnomad_r3",
        "id": "19-40394679-C-T",
        "variant": "19:40394679 C / T"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40394679-C-T?dataset=gnomad_r4",
        "id": "19-40394679-C-T",
        "variant": "19:40394679 C / T"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "T",
          "end": 40394679,
          "referenceAllele": "C",
          "start": 40394678
        }
      ],
      "hgvs": [
        "NC_000019.10:g.40394679C>T",
        "CM000681.2:g.40394679C>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000067"
    },
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "T",
          "end": 40900586,
          "referenceAllele": "C",
          "start": 40900585
        }
      ],
      "hgvs": [
        "NC_000019.9:g.40900586C>T",
        "CM000681.1:g.40900586C>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000043"
    },
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "T",
          "end": 45592426,
          "referenceAllele": "C",
          "start": 45592425
        }
      ],
      "hgvs": [
        "NC_000019.8:g.45592426C>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000019"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 23686,
          "referenceAllele": "G",
          "start": 23685
        }
      ],
      "hgvs": [
        "NG_007979.1:g.23686G>A",
        "LRG_265:g.23686G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS000747"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 543,
          "referenceAllele": "G",
          "start": 542
        }
      ],
      "hgvs": [
        "NG_051224.1:g.543G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS616912"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3956,
          "referenceAllele": "G",
          "start": 3955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000324001.8:c.3673G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000326018.6:p.Val1225Met",
        "hgvsWellDefined": "ENSP00000326018.6:p.Val1225Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS746601",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000324001.8:c.3673G>A"
          },
          "RefSeq": {
            "hgvs": "NM_181882.3:c.3673G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000326018.6:p.Val1225Met"
          },
          "RefSeq": {
            "hgvs": "NP_870998.2:p.Val1225Met"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4072,
          "referenceAllele": "G",
          "start": 4071
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000673881.1:c.3256G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000501070.1:p.Val1086Met",
        "hgvsWellDefined": "ENSP00000501070.1:p.Val1086Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS773939"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4009,
          "referenceAllele": "G",
          "start": 4008
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000674005.2:c.3958G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000501261.1:p.Val1320Met",
        "hgvsWellDefined": "ENSP00000501261.1:p.Val1320Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS774039"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3522,
          "referenceAllele": "G",
          "start": 3521
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000674773.1:c.3256G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000502579.1:p.Val1086Met",
        "hgvsWellDefined": "ENSP00000502579.1:p.Val1086Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS774689"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3548,
          "referenceAllele": "G",
          "start": 3547
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000675517.1:c.3548G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775326"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3534,
          "referenceAllele": "G",
          "start": 3533
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676076.1:c.3534G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775811"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3635,
          "referenceAllele": "G",
          "start": 3634
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676260.1:c.3635G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775970"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3560,
          "referenceAllele": "G",
          "start": 3559
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676316.1:c.3560G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS776013"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4591,
          "referenceAllele": "G",
          "start": 4590
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000291825.11:c.*3878G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000291825.6:n.*3878G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS253765"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3944,
          "referenceAllele": "G",
          "start": 3943
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000324001.7:c.3673G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000326018.6:p.Val1225Met",
        "hgvsWellDefined": "ENSP00000326018.6:p.Val1225Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS258283"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4591,
          "referenceAllele": "G",
          "start": 4590
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_020956.2:c.*3878G>A",
        "LRG_265t1:c.*3878G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_066007.1:n.*3878G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS036720"
    },
    {
      "@id": "http://reg.genome.network/allele/PA1139748410",
      "coordinates": [
        {
          "allele": "A",
          "end": 3942,
          "referenceAllele": "G",
          "start": 3941
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_181882.2:c.3673G>A",
        "LRG_265t2:c.3673G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_870998.2:p.Val1225Met",
        "hgvsWellDefined": "NP_870998.2:p.Val1225Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS043920"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3934,
          "referenceAllele": "G",
          "start": 3933
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_011527171.1:c.3673G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011525473.1:p.Val1225Met",
        "hgvsWellDefined": "XP_011525473.1:p.Val1225Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS094265"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3934,
          "referenceAllele": "G",
          "start": 3933
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_011527171.2:c.3673G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011525473.1:p.Val1225Met",
        "hgvsWellDefined": "XP_011525473.1:p.Val1225Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS548559"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4093,
          "referenceAllele": "G",
          "start": 4092
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_017027046.1:c.3571G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016882535.1:p.Val1191Met",
        "hgvsWellDefined": "XP_016882535.1:p.Val1191Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS577044"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3636,
          "referenceAllele": "G",
          "start": 3635
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_017027047.1:c.3571G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016882536.1:p.Val1191Met",
        "hgvsWellDefined": "XP_016882536.1:p.Val1191Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS577045"
    },
    {
      "@id": "http://reg.genome.network/allele/PA1139748410",
      "coordinates": [
        {
          "allele": "A",
          "end": 3956,
          "referenceAllele": "G",
          "start": 3955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_181882.3:c.3673G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_870998.2:p.Val1225Met",
        "hgvsWellDefined": "NP_870998.2:p.Val1225Met"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS701039",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000324001.8:c.3673G>A"
          },
          "RefSeq": {
            "hgvs": "NM_181882.3:c.3673G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000326018.6:p.Val1225Met"
          },
          "RefSeq": {
            "hgvs": "NP_870998.2:p.Val1225Met"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}