{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA915940909",
  "communityStandardTitle": [
    "NM_000088.4(COL1A1):c.103+5G>C"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=851735[alleleid]",
        "alleleId": 851735,
        "preferredName": "NM_000088.4(COL1A1):c.103+5G>C"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/836318",
        "RCV": [
          "RCV001037422"
        ],
        "variationId": 836318
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/1555575835",
        "rs": 1555575835
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "17",
      "coordinates": [
        {
          "allele": "G",
          "end": 50201406,
          "referenceAllele": "C",
          "start": 50201405
        }
      ],
      "hgvs": [
        "NC_000017.11:g.50201406C>G",
        "CM000679.2:g.50201406C>G"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000065"
    },
    {
      "chromosome": "17",
      "coordinates": [
        {
          "allele": "G",
          "end": 48278767,
          "referenceAllele": "C",
          "start": 48278766
        }
      ],
      "hgvs": [
        "NC_000017.10:g.48278767C>G",
        "CM000679.1:g.48278767C>G"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000041"
    },
    {
      "chromosome": "17",
      "coordinates": [
        {
          "allele": "G",
          "end": 45633766,
          "referenceAllele": "C",
          "start": 45633765
        }
      ],
      "hgvs": [
        "NC_000017.9:g.45633766C>G"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000017"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 5234,
          "referenceAllele": "G",
          "start": 5233
        }
      ],
      "hgvs": [
        "NG_007400.1:g.5234G>C",
        "LRG_1:g.5234G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS000567"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 221,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 221,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "ENST00000225964.10:c.103+5G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000225964.6:n.103+5G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS740684",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000225964.10:c.103+5G>C"
          },
          "RefSeq": {
            "hgvs": "NM_000088.4:c.103+5G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000225964.6:n.103+5G>C"
          },
          "RefSeq": {
            "hgvs": "NP_000079.2:n.103+5G>C"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 222,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 222,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "ENST00000225964.9:c.103+5G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000225964.5:n.103+5G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS248535"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 222,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 222,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "ENST00000474644.1:n.222+5G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS316108"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 229,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 229,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "NM_000088.3:c.103+5G>C",
        "LRG_1t1:c.103+5G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000079.2:n.103+5G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006152"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 238,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 238,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "XM_005257058.3:c.103+5G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005257115.2:n.103+5G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS061555"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 237,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 237,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "XM_005257059.3:c.103+5G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005257116.2:n.103+5G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS061556"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 238,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 238,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "XM_011524341.1:c.103+5G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011522643.1:n.103+5G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS091468"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 239,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 239,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "XM_005257058.4:c.103+5G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005257115.2:n.103+5G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS534587"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 238,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 238,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "XM_005257059.4:c.103+5G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005257116.2:n.103+5G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS534588"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 221,
          "endIntronDirection": "+",
          "endIntronOffset": 5,
          "referenceAllele": "G",
          "start": 221,
          "startIntronDirection": "+",
          "startIntronOffset": 4
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002197",
      "geneNCBI_id": 1277,
      "geneSymbol": "COL1A1",
      "hgvs": [
        "NM_000088.4:c.103+5G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000079.2:n.103+5G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS674695",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000225964.10:c.103+5G>C"
          },
          "RefSeq": {
            "hgvs": "NM_000088.4:c.103+5G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000225964.6:n.103+5G>C"
          },
          "RefSeq": {
            "hgvs": "NP_000079.2:n.103+5G>C"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}