{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA8709054",
  "communityStandardTitle": [
    "NM_000334.4(SCN4A):c.4083C>A (p.Ile1361=)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=694149[alleleid]",
        "alleleId": 694149,
        "preferredName": "NM_000334.4(SCN4A):c.4083C>A (p.Ile1361=)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/705783",
        "RCV": [
          "RCV000876179",
          "RCV001128511",
          "RCV001128513",
          "RCV001128509",
          "RCV001128510",
          "RCV001128512"
        ],
        "variationId": 705783
      }
    ],
    "ExAC": [
      {
        "@id": "http://exac.broadinstitute.org/variant/17-62020391-G-T",
        "id": "17-62020391-G-T",
        "variant": "17:62020391 G / T"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr17:g.62020391G>T?assembly=hg19",
        "id": "chr17:g.62020391G>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr17:g.63943031G>T?assembly=hg38",
        "id": "chr17:g.63943031G>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/374480468",
        "rs": 374480468
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/17-62020391-G-T?dataset=gnomad_r2_1",
        "id": "17-62020391-G-T",
        "variant": "17:62020391 G / T"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/17-63943031-G-T?dataset=gnomad_r3",
        "id": "17-63943031-G-T",
        "variant": "17:63943031 G / T"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/17-63943031-G-T?dataset=gnomad_r4",
        "id": "17-63943031-G-T",
        "variant": "17:63943031 G / T"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "17",
      "coordinates": [
        {
          "allele": "T",
          "end": 63943031,
          "referenceAllele": "G",
          "start": 63943030
        }
      ],
      "hgvs": [
        "NC_000017.11:g.63943031G>T",
        "CM000679.2:g.63943031G>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000065"
    },
    {
      "chromosome": "17",
      "coordinates": [
        {
          "allele": "T",
          "end": 62020391,
          "referenceAllele": "G",
          "start": 62020390
        }
      ],
      "hgvs": [
        "NC_000017.10:g.62020391G>T",
        "CM000679.1:g.62020391G>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000041"
    },
    {
      "chromosome": "17",
      "coordinates": [
        {
          "allele": "T",
          "end": 59374123,
          "referenceAllele": "G",
          "start": 59374122
        }
      ],
      "hgvs": [
        "NC_000017.9:g.59374123G>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000017"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 34888,
          "referenceAllele": "C",
          "start": 34887
        }
      ],
      "hgvs": [
        "NG_011699.1:g.34888C>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001908"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4160,
          "referenceAllele": "C",
          "start": 4159
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010591",
      "geneNCBI_id": 6329,
      "geneSymbol": "SCN4A",
      "hgvs": [
        "ENST00000435607.3:c.4083C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000396320.1:p.Ile1361="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS293592",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000435607.3:c.4083C>A"
          },
          "RefSeq": {
            "hgvs": "NM_000334.4:c.4083C>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000396320.1:p.Ile1361="
          },
          "RefSeq": {
            "hgvs": "NP_000325.4:p.Ile1361="
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4160,
          "referenceAllele": "C",
          "start": 4159
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010591",
      "geneNCBI_id": 6329,
      "geneSymbol": "SCN4A",
      "hgvs": [
        "ENST00000578147.5:c.4083C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000463963.1:p.Ile1361="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS385208"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825127519",
      "coordinates": [
        {
          "allele": "A",
          "end": 4160,
          "referenceAllele": "C",
          "start": 4159
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010591",
      "geneNCBI_id": 6329,
      "geneSymbol": "SCN4A",
      "hgvs": [
        "NM_000334.4:c.4083C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_000325.4:p.Ile1361="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006397",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000435607.3:c.4083C>A"
          },
          "RefSeq": {
            "hgvs": "NM_000334.4:c.4083C>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000396320.1:p.Ile1361="
          },
          "RefSeq": {
            "hgvs": "NP_000325.4:p.Ile1361="
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5255,
          "referenceAllele": "C",
          "start": 5254
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010591",
      "geneNCBI_id": 6329,
      "geneSymbol": "SCN4A",
      "hgvs": [
        "XM_005257566.3:c.4083C>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005257623.1:p.Ile1361="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS061757"
    }
  ],
  "type": "nucleotide"
}