{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA7939222",
  "communityStandardTitle": [
    "NM_003361.4(UMOD):c.1243C>T (p.Arg415Cys)"
  ],
  "externalRecords": {
    "COSMIC": [
      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=968025",
        "active": true,
        "id": "COSM968025"
      },
      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=4873060",
        "active": true,
        "id": "COSM4873060"
      }
    ],
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=874831[alleleid]",
        "alleleId": 874831,
        "preferredName": "NM_003361.4(UMOD):c.1243C>T (p.Arg415Cys)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/884577",
        "RCV": [
          "RCV001171321",
          "RCV002251386"
        ],
        "variationId": 884577
      }
    ],
    "ExAC": [
      {
        "@id": "http://exac.broadinstitute.org/variant/16-20355434-G-A",
        "id": "16-20355434-G-A",
        "variant": "16:20355434 G / A"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr16:g.20355434G>A?assembly=hg19",
        "id": "chr16:g.20355434G>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr16:g.20344112G>A?assembly=hg38",
        "id": "chr16:g.20344112G>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/758221597",
        "rs": 758221597
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/16-20355434-G-A?dataset=gnomad_r2_1",
        "id": "16-20355434-G-A",
        "variant": "16:20355434 G / A"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/16-20344112-G-A?dataset=gnomad_r3",
        "id": "16-20344112-G-A",
        "variant": "16:20344112 G / A"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/16-20344112-G-A?dataset=gnomad_r4",
        "id": "16-20344112-G-A",
        "variant": "16:20344112 G / A"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "16",
      "coordinates": [
        {
          "allele": "A",
          "end": 20344112,
          "referenceAllele": "G",
          "start": 20344111
        }
      ],
      "hgvs": [
        "NC_000016.10:g.20344112G>A",
        "CM000678.2:g.20344112G>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000064"
    },
    {
      "chromosome": "16",
      "coordinates": [
        {
          "allele": "A",
          "end": 20355434,
          "referenceAllele": "G",
          "start": 20355433
        }
      ],
      "hgvs": [
        "NC_000016.9:g.20355434G>A",
        "CM000678.1:g.20355434G>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000040"
    },
    {
      "chromosome": "16",
      "coordinates": [
        {
          "allele": "A",
          "end": 20262935,
          "referenceAllele": "G",
          "start": 20262934
        }
      ],
      "hgvs": [
        "NC_000016.8:g.20262935G>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000016"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 13604,
          "referenceAllele": "C",
          "start": 13603
        }
      ],
      "hgvs": [
        "NG_008151.1:g.13604C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS000897"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1372,
          "referenceAllele": "C",
          "start": 1371
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "ENST00000396138.9:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000379442.5:p.Arg415Cys",
        "hgvsWellDefined": "ENSP00000379442.5:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS753491",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000396138.9:c.1243C>T"
          },
          "RefSeq": {
            "hgvs": "NM_003361.4:c.1243C>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000379442.5:p.Arg415Cys"
          },
          "RefSeq": {
            "hgvs": "NP_003352.2:p.Arg415Cys"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1535,
          "referenceAllele": "C",
          "start": 1534
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "ENST00000302509.8:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000306279.4:p.Arg415Cys",
        "hgvsWellDefined": "ENSP00000306279.4:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS255189"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1466,
          "referenceAllele": "C",
          "start": 1465
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "ENST00000396134.6:c.1342C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000379438.2:p.Arg448Cys",
        "hgvsWellDefined": "ENSP00000379438.2:p.Arg448Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS277113"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1457,
          "referenceAllele": "C",
          "start": 1456
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "ENST00000396138.8:c.1390C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000379442.4:p.Arg464Cys",
        "hgvsWellDefined": "ENSP00000379442.4:p.Arg464Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS277116"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1390,
          "referenceAllele": "C",
          "start": 1389
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "ENST00000570689.5:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000460548.1:p.Arg415Cys",
        "hgvsWellDefined": "ENSP00000460548.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS382193"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825291513",
      "coordinates": [
        {
          "allele": "T",
          "end": 1472,
          "referenceAllele": "C",
          "start": 1471
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_001008389.2:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001008390.1:p.Arg415Cys",
        "hgvsWellDefined": "NP_001008390.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS007987"
    },
    {
      "@id": "http://reg.genome.network/allele/PA1139688431",
      "coordinates": [
        {
          "allele": "T",
          "end": 1634,
          "referenceAllele": "C",
          "start": 1633
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_001278614.1:c.1342C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001265543.1:p.Arg448Cys",
        "hgvsWellDefined": "NP_001265543.1:p.Arg448Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS021410"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2829447488",
      "coordinates": [
        {
          "allele": "T",
          "end": 1535,
          "referenceAllele": "C",
          "start": 1534
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_003361.3:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_003352.2:p.Arg415Cys",
        "hgvsWellDefined": "NP_003352.2:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS028607"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1472,
          "referenceAllele": "C",
          "start": 1471
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_011545934.1:c.1327C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011544236.1:p.Arg443Cys",
        "hgvsWellDefined": "XP_011544236.1:p.Arg443Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112816"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1531,
          "referenceAllele": "C",
          "start": 1530
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_011545935.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011544237.1:p.Arg415Cys",
        "hgvsWellDefined": "XP_011544237.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112817"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1468,
          "referenceAllele": "C",
          "start": 1467
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_011545936.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011544238.1:p.Arg415Cys",
        "hgvsWellDefined": "XP_011544238.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112818"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1358,
          "referenceAllele": "C",
          "start": 1357
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_011545937.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011544239.1:p.Arg415Cys",
        "hgvsWellDefined": "XP_011544239.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112819"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1390,
          "referenceAllele": "C",
          "start": 1389
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_011545938.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011544240.1:p.Arg415Cys",
        "hgvsWellDefined": "XP_011544240.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112820"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1472,
          "referenceAllele": "C",
          "start": 1471
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_011545939.1:c.1327C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011544241.1:p.Arg443Cys",
        "hgvsWellDefined": "XP_011544241.1:p.Arg443Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112821"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1408,
          "referenceAllele": "C",
          "start": 1407
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_011545940.1:c.1390C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011544242.1:p.Arg464Cys",
        "hgvsWellDefined": "XP_011544242.1:p.Arg464Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112822"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1309,
          "referenceAllele": "C",
          "start": 1308
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_011545934.2:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011544236.2:p.Arg415Cys",
        "hgvsWellDefined": "XP_011544236.2:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS556312"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1372,
          "referenceAllele": "C",
          "start": 1371
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_011545940.2:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011544242.2:p.Arg415Cys",
        "hgvsWellDefined": "XP_011544242.2:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS556313"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1515,
          "referenceAllele": "C",
          "start": 1514
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "XM_024450433.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_024306201.1:p.Arg415Cys",
        "hgvsWellDefined": "XP_024306201.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS583969"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825291513",
      "coordinates": [
        {
          "allele": "T",
          "end": 1309,
          "referenceAllele": "C",
          "start": 1308
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_001008389.3:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001008390.1:p.Arg415Cys",
        "hgvsWellDefined": "NP_001008390.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS675306"
    },
    {
      "@id": "http://reg.genome.network/allele/PA1139688431",
      "coordinates": [
        {
          "allele": "T",
          "end": 1471,
          "referenceAllele": "C",
          "start": 1470
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_001278614.2:c.1342C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001265543.1:p.Arg448Cys",
        "hgvsWellDefined": "NP_001265543.1:p.Arg448Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS681526"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2828749382",
      "coordinates": [
        {
          "allele": "T",
          "end": 1468,
          "referenceAllele": "C",
          "start": 1467
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_001378232.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001365161.1:p.Arg415Cys",
        "hgvsWellDefined": "NP_001365161.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS721584"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2828749703",
      "coordinates": [
        {
          "allele": "T",
          "end": 1531,
          "referenceAllele": "C",
          "start": 1530
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_001378233.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001365162.1:p.Arg415Cys",
        "hgvsWellDefined": "NP_001365162.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS721585"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2828750024",
      "coordinates": [
        {
          "allele": "T",
          "end": 1309,
          "referenceAllele": "C",
          "start": 1308
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_001378234.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001365163.1:p.Arg415Cys",
        "hgvsWellDefined": "NP_001365163.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS721586"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2828750346",
      "coordinates": [
        {
          "allele": "T",
          "end": 1372,
          "referenceAllele": "C",
          "start": 1371
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_001378235.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001365164.1:p.Arg415Cys",
        "hgvsWellDefined": "NP_001365164.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS721587"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2828750616",
      "coordinates": [
        {
          "allele": "T",
          "end": 1468,
          "referenceAllele": "C",
          "start": 1467
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_001378237.1:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001365166.1:p.Arg415Cys",
        "hgvsWellDefined": "NP_001365166.1:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS721588"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2829447488",
      "coordinates": [
        {
          "allele": "T",
          "end": 1372,
          "referenceAllele": "C",
          "start": 1371
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NM_003361.4:c.1243C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_003352.2:p.Arg415Cys",
        "hgvsWellDefined": "NP_003352.2:p.Arg415Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS727377",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000396138.9:c.1243C>T"
          },
          "RefSeq": {
            "hgvs": "NM_003361.4:c.1243C>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000379442.5:p.Arg415Cys"
          },
          "RefSeq": {
            "hgvs": "NP_003352.2:p.Arg415Cys"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1466,
          "referenceAllele": "C",
          "start": 1465
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012559",
      "geneNCBI_id": 7369,
      "geneSymbol": "UMOD",
      "hgvs": [
        "NR_165456.1:n.1466C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS731721"
    }
  ],
  "type": "nucleotide"
}