{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA6548551",
  "communityStandardTitle": [
    "NM_003482.4(KMT2D):c.1174T>C (p.Cys392Arg)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=1972815[alleleid]",
        "alleleId": 1972815,
        "preferredName": "NM_003482.4(KMT2D):c.1174T>C (p.Cys392Arg)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/1910005",
        "RCV": [
          "RCV002600611"
        ],
        "variationId": 1910005
      }
    ],
    "ExAC": [
      {
        "@id": "http://exac.broadinstitute.org/variant/12-49446431-A-G",
        "id": "12-49446431-A-G",
        "variant": "12:49446431 A / G"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr12:g.49446431A>G?assembly=hg19",
        "id": "chr12:g.49446431A>G"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr12:g.49052648A>G?assembly=hg38",
        "id": "chr12:g.49052648A>G"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/769828573",
        "rs": 769828573
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/12-49446431-A-G?dataset=gnomad_r2_1",
        "id": "12-49446431-A-G",
        "variant": "12:49446431 A / G"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/12-49052648-A-G?dataset=gnomad_r3",
        "id": "12-49052648-A-G",
        "variant": "12:49052648 A / G"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/12-49052648-A-G?dataset=gnomad_r4",
        "id": "12-49052648-A-G",
        "variant": "12:49052648 A / G"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "12",
      "coordinates": [
        {
          "allele": "G",
          "end": 49052648,
          "referenceAllele": "A",
          "start": 49052647
        }
      ],
      "hgvs": [
        "NC_000012.12:g.49052648A>G",
        "CM000674.2:g.49052648A>G"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000060"
    },
    {
      "chromosome": "12",
      "coordinates": [
        {
          "allele": "G",
          "end": 49446431,
          "referenceAllele": "A",
          "start": 49446430
        }
      ],
      "hgvs": [
        "NC_000012.11:g.49446431A>G",
        "CM000674.1:g.49446431A>G"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000036"
    },
    {
      "chromosome": "12",
      "coordinates": [
        {
          "allele": "G",
          "end": 47732698,
          "referenceAllele": "A",
          "start": 47732697
        }
      ],
      "hgvs": [
        "NC_000012.10:g.47732698A>G"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000012"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 7677,
          "referenceAllele": "T",
          "start": 7676
        }
      ],
      "hgvs": [
        "NG_027827.1:g.7677T>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS003992"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2393,
          "referenceAllele": "T",
          "start": 2392
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "ENST00000683543.2:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000506726.1:p.Cys392Arg",
        "hgvsWellDefined": "ENSP00000506726.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS828517"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1174,
          "referenceAllele": "T",
          "start": 1173
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "ENST00000685166.1:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000509386.1:p.Cys392Arg",
        "hgvsWellDefined": "ENSP00000509386.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS829915"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 650,
          "referenceAllele": "T",
          "start": 649
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "ENST00000686968.1:c.650T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000509151.1:n.650T>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS830838"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1174,
          "referenceAllele": "T",
          "start": 1173
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "ENST00000692637.1:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000509666.1:p.Cys392Arg",
        "hgvsWellDefined": "ENSP00000509666.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS833805"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2393,
          "referenceAllele": "T",
          "start": 2392
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "ENST00000301067.12:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000301067.7:p.Cys392Arg",
        "hgvsWellDefined": "ENSP00000301067.7:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS744808",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000301067.12:c.1174T>C"
          },
          "RefSeq": {
            "hgvs": "NM_003482.4:c.1174T>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000301067.7:p.Cys392Arg"
          },
          "RefSeq": {
            "hgvs": "NP_003473.3:p.Cys392Arg"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1174,
          "referenceAllele": "T",
          "start": 1173
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "ENST00000301067.11:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000301067.7:p.Cys392Arg",
        "hgvsWellDefined": "ENSP00000301067.7:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS254955"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2580283399",
      "coordinates": [
        {
          "allele": "C",
          "end": 1174,
          "referenceAllele": "T",
          "start": 1173
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "NM_003482.3:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_003473.3:p.Cys392Arg",
        "hgvsWellDefined": "NP_003473.3:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS028721"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2468,
          "referenceAllele": "T",
          "start": 2467
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_005269162.3:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005269219.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_005269219.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS066041"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2468,
          "referenceAllele": "T",
          "start": 2467
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_006719614.2:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_006719677.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_006719677.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS073234"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2467,
          "referenceAllele": "T",
          "start": 2466
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_006719616.2:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_006719679.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_006719679.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS073235"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2475,
          "referenceAllele": "T",
          "start": 2474
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538770.1:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537072.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537072.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS105724"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2475,
          "referenceAllele": "T",
          "start": 2474
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538771.1:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537073.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537073.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS105725"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2474,
          "referenceAllele": "T",
          "start": 2473
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538772.1:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537074.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537074.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS105726"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2474,
          "referenceAllele": "T",
          "start": 2473
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538773.1:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537075.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537075.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS105727"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2476,
          "referenceAllele": "T",
          "start": 2475
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538774.1:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537076.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537076.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS105728"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2478,
          "referenceAllele": "T",
          "start": 2477
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538775.1:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537077.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537077.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS105729"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2475,
          "referenceAllele": "T",
          "start": 2474
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538776.1:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537078.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537078.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS105730"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3494,
          "referenceAllele": "T",
          "start": 3493
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XR_944740.1:n.3494T>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS138562"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2453,
          "referenceAllele": "T",
          "start": 2452
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_005269162.4:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005269219.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_005269219.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS536724"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2454,
          "referenceAllele": "T",
          "start": 2453
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_006719614.4:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_006719677.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_006719677.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS539912"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2453,
          "referenceAllele": "T",
          "start": 2452
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_006719616.3:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_006719679.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_006719679.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS539913"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2456,
          "referenceAllele": "T",
          "start": 2455
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538770.2:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537072.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537072.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS553412"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2456,
          "referenceAllele": "T",
          "start": 2455
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538771.2:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537073.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537073.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS553413"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2456,
          "referenceAllele": "T",
          "start": 2455
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538772.2:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537074.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537074.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS553414"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2456,
          "referenceAllele": "T",
          "start": 2455
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538773.2:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537075.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537075.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS553415"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2457,
          "referenceAllele": "T",
          "start": 2456
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538774.2:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537076.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537076.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS553416"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2456,
          "referenceAllele": "T",
          "start": 2455
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XM_011538776.2:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011537078.1:p.Cys392Arg",
        "hgvsWellDefined": "XP_011537078.1:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS553417"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2483,
          "referenceAllele": "T",
          "start": 2482
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "XR_001748874.1:n.2483T>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS596813"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2580283399",
      "coordinates": [
        {
          "allele": "C",
          "end": 2393,
          "referenceAllele": "T",
          "start": 2392
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007133",
      "geneNCBI_id": 8085,
      "geneSymbol": "KMT2D",
      "hgvs": [
        "NM_003482.4:c.1174T>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_003473.3:p.Cys392Arg",
        "hgvsWellDefined": "NP_003473.3:p.Cys392Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS695846",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000301067.12:c.1174T>C"
          },
          "RefSeq": {
            "hgvs": "NM_003482.4:c.1174T>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000301067.7:p.Cys392Arg"
          },
          "RefSeq": {
            "hgvs": "NP_003473.3:p.Cys392Arg"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}