{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA6129466",
  "communityStandardTitle": [
    "NM_006946.4(SPTBN2):c.1160G>A (p.Arg387His)"
  ],
  "externalRecords": {
    "COSMIC": [
      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=930910",
        "active": true,
        "id": "COSM930910"
      },
      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=4863301",
        "active": true,
        "id": "COSM4863301"
      }
    ],
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=793950[alleleid]",
        "alleleId": 793950,
        "preferredName": "NM_006946.4(SPTBN2):c.1160G>A (p.Arg387His)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/805333",
        "RCV": [
          "RCV000992840",
          "RCV002225122"
        ],
        "variationId": 805333
      }
    ],
    "ExAC": [
      {
        "@id": "http://exac.broadinstitute.org/variant/11-66476404-C-T",
        "id": "11-66476404-C-T",
        "variant": "11:66476404 C / T"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr11:g.66476404C>T?assembly=hg19",
        "id": "chr11:g.66476404C>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr11:g.66708933C>T?assembly=hg38",
        "id": "chr11:g.66708933C>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/772590586",
        "rs": 772590586
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/11-66476404-C-T?dataset=gnomad_r2_1",
        "id": "11-66476404-C-T",
        "variant": "11:66476404 C / T"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/11-66708933-C-T?dataset=gnomad_r3",
        "id": "11-66708933-C-T",
        "variant": "11:66708933 C / T"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/11-66708933-C-T?dataset=gnomad_r4",
        "id": "11-66708933-C-T",
        "variant": "11:66708933 C / T"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "T",
          "end": 66708933,
          "referenceAllele": "C",
          "start": 66708932
        }
      ],
      "hgvs": [
        "NC_000011.10:g.66708933C>T",
        "CM000673.2:g.66708933C>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000059"
    },
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "T",
          "end": 66476404,
          "referenceAllele": "C",
          "start": 66476403
        }
      ],
      "hgvs": [
        "NC_000011.9:g.66476404C>T",
        "CM000673.1:g.66476404C>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000035"
    },
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "T",
          "end": 66232980,
          "referenceAllele": "C",
          "start": 66232979
        }
      ],
      "hgvs": [
        "NC_000011.8:g.66232980C>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000011"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 17467,
          "referenceAllele": "G",
          "start": 17466
        }
      ],
      "hgvs": [
        "NG_016150.1:g.17467G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS002979"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 25429,
          "referenceAllele": "G",
          "start": 25428
        }
      ],
      "hgvs": [
        "NG_016150.2:g.25429G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS616214"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1668,
          "referenceAllele": "G",
          "start": 1667
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000309996.7:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000311489.2:p.Arg387His",
        "hgvsWellDefined": "ENSP00000311489.2:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS823796"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1763,
          "referenceAllele": "G",
          "start": 1762
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000611817.5:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000480692.2:p.Arg387His",
        "hgvsWellDefined": "ENSP00000480692.2:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS826411"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1433,
          "referenceAllele": "G",
          "start": 1432
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000617502.5:c.1181G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000482000.2:p.Arg394His",
        "hgvsWellDefined": "ENSP00000482000.2:p.Arg394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS826498"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1845,
          "referenceAllele": "G",
          "start": 1844
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000647510.2:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000508362.1:p.Arg387His",
        "hgvsWellDefined": "ENSP00000508362.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS826758"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1749,
          "referenceAllele": "G",
          "start": 1748
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000533211.6:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000432568.1:p.Arg387His",
        "hgvsWellDefined": "ENSP00000432568.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS759327",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000533211.6:c.1160G>A"
          },
          "RefSeq": {
            "hgvs": "NM_006946.4:c.1160G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000432568.1:p.Arg387His"
          },
          "RefSeq": {
            "hgvs": "NP_008877.2:p.Arg387His"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1687,
          "referenceAllele": "G",
          "start": 1686
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000647510.1:n.1687G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS769455"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1232,
          "referenceAllele": "G",
          "start": 1231
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000309996.6:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000311489.2:p.Arg387His",
        "hgvsWellDefined": "ENSP00000311489.2:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS256299"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1160,
          "referenceAllele": "G",
          "start": 1159
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000529997.5:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000433593.1:p.Arg387His",
        "hgvsWellDefined": "ENSP00000433593.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS355320"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1492,
          "referenceAllele": "G",
          "start": 1491
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000533211.5:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000432568.1:p.Arg387His",
        "hgvsWellDefined": "ENSP00000432568.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS358020"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1203,
          "referenceAllele": "G",
          "start": 1202
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000611817.4:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000480692.1:p.Arg387His",
        "hgvsWellDefined": "ENSP00000480692.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS401027"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1232,
          "referenceAllele": "G",
          "start": 1231
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "ENST00000617502.4:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000482000.1:p.Arg387His",
        "hgvsWellDefined": "ENSP00000482000.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS403508"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1232,
          "referenceAllele": "G",
          "start": 1231
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "NM_006946.2:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_008877.1:p.Arg387His",
        "hgvsWellDefined": "NP_008877.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS031918"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1770,
          "referenceAllele": "G",
          "start": 1769
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_005274192.3:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005274249.1:p.Arg387His",
        "hgvsWellDefined": "XP_005274249.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS067859"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1668,
          "referenceAllele": "G",
          "start": 1667
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_005274193.3:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005274250.1:p.Arg387His",
        "hgvsWellDefined": "XP_005274250.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS067860"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1433,
          "referenceAllele": "G",
          "start": 1432
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_006718669.2:c.1181G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_006718732.1:p.Arg394His",
        "hgvsWellDefined": "XP_006718732.1:p.Arg394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS072743"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1296,
          "referenceAllele": "G",
          "start": 1295
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_006718671.2:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_006718734.1:p.Arg387His",
        "hgvsWellDefined": "XP_006718734.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS072744"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1446,
          "referenceAllele": "G",
          "start": 1445
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_011545216.1:c.1181G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543518.1:p.Arg394His",
        "hgvsWellDefined": "XP_011543518.1:p.Arg394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112120"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1445,
          "referenceAllele": "G",
          "start": 1444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_011545217.1:c.1181G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543519.1:p.Arg394His",
        "hgvsWellDefined": "XP_011543519.1:p.Arg394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112121"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1232,
          "referenceAllele": "G",
          "start": 1231
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "NM_006946.3:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_008877.1:p.Arg387His",
        "hgvsWellDefined": "NP_008877.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS525440"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1894,
          "referenceAllele": "G",
          "start": 1893
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_005274192.4:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005274249.1:p.Arg387His",
        "hgvsWellDefined": "XP_005274249.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS537569"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3581,
          "referenceAllele": "G",
          "start": 3580
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_006718669.3:c.1181G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_006718732.1:p.Arg394His",
        "hgvsWellDefined": "XP_006718732.1:p.Arg394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS539676"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1295,
          "referenceAllele": "G",
          "start": 1294
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_006718671.4:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_006718734.1:p.Arg387His",
        "hgvsWellDefined": "XP_006718734.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS539677"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3591,
          "referenceAllele": "G",
          "start": 3590
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_011545216.3:c.1181G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543518.1:p.Arg394His",
        "hgvsWellDefined": "XP_011543518.1:p.Arg394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS555992"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3591,
          "referenceAllele": "G",
          "start": 3590
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_011545217.2:c.1181G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543519.1:p.Arg394His",
        "hgvsWellDefined": "XP_011543519.1:p.Arg394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS555993"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1986,
          "referenceAllele": "G",
          "start": 1985
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_017018174.1:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016873663.1:p.Arg387His",
        "hgvsWellDefined": "XP_016873663.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS570178"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1616,
          "referenceAllele": "G",
          "start": 1615
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_017018175.2:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016873664.1:p.Arg387His",
        "hgvsWellDefined": "XP_016873664.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS570179"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1335,
          "referenceAllele": "G",
          "start": 1334
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_017018176.1:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016873665.1:p.Arg387His",
        "hgvsWellDefined": "XP_016873665.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS570180"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1525,
          "referenceAllele": "G",
          "start": 1524
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_017018177.2:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016873666.1:p.Arg387His",
        "hgvsWellDefined": "XP_016873666.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS570181"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1207,
          "referenceAllele": "G",
          "start": 1206
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "XM_017018178.1:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016873667.1:p.Arg387His",
        "hgvsWellDefined": "XP_016873667.1:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS570182"
    },
    {
      "@id": "http://reg.genome.network/allele/PA1139718822",
      "coordinates": [
        {
          "allele": "A",
          "end": 1749,
          "referenceAllele": "G",
          "start": 1748
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011276",
      "geneNCBI_id": 6712,
      "geneSymbol": "SPTBN2",
      "hgvs": [
        "NM_006946.4:c.1160G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_008877.2:p.Arg387His",
        "hgvsWellDefined": "NP_008877.2:p.Arg387His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS696863",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000533211.6:c.1160G>A"
          },
          "RefSeq": {
            "hgvs": "NM_006946.4:c.1160G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000432568.1:p.Arg387His"
          },
          "RefSeq": {
            "hgvs": "NP_008877.2:p.Arg387His"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}