{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA414700070",
  "communityStandardTitle": [
    "NM_004484.4(GPC3):c.1064G>A (p.Arg355His)"
  ],
  "externalRecords": {
    "COSMIC": [
      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=4687761",
        "active": true,
        "id": "COSM4687761"
      },
      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=4687762",
        "active": true,
        "id": "COSM4687762"
      }
    ],
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=534497[alleleid]",
        "alleleId": 534497,
        "preferredName": "NM_004484.4(GPC3):c.1064G>A (p.Arg355His)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/543088",
        "RCV": [
          "RCV000653748"
        ],
        "variationId": 543088
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.132834025C>T?assembly=hg19",
        "id": "chrX:g.132834025C>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.133699997C>T?assembly=hg38",
        "id": "chrX:g.133699997C>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/1556271627",
        "rs": 1556271627
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/X-133699997-C-T?dataset=gnomad_r3",
        "id": "X-133699997-C-T",
        "variant": "X:133699997 C / T"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/X-133699997-C-T?dataset=gnomad_r4",
        "id": "X-133699997-C-T",
        "variant": "X:133699997 C / T"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "T",
          "end": 133699997,
          "referenceAllele": "C",
          "start": 133699996
        }
      ],
      "hgvs": [
        "NC_000023.11:g.133699997C>T",
        "CM000685.2:g.133699997C>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000071"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "T",
          "end": 132834025,
          "referenceAllele": "C",
          "start": 132834024
        }
      ],
      "hgvs": [
        "NC_000023.10:g.132834025C>T",
        "CM000685.1:g.132834025C>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000047"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "T",
          "end": 132661691,
          "referenceAllele": "C",
          "start": 132661690
        }
      ],
      "hgvs": [
        "NC_000023.9:g.132661691C>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000023"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 290642,
          "referenceAllele": "G",
          "start": 290641
        }
      ],
      "hgvs": [
        "NG_009286.1:g.290642G>A",
        "LRG_505:g.290642G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001543"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 253,
          "referenceAllele": "G",
          "start": 252
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000406757.3:c.253G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS824589"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 95,
          "referenceAllele": "G",
          "start": 94
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000666673.2:n.95G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS826849"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1280,
          "referenceAllele": "G",
          "start": 1279
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000684880.1:c.*652G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000510280.1:n.*652G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS829775"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1184,
          "referenceAllele": "G",
          "start": 1183
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000689310.1:c.1016G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000510438.1:p.Arg339His",
        "hgvsWellDefined": "ENSP00000510438.1:p.Arg339His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS832103"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 351,
          "referenceAllele": "G",
          "start": 350
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000692084.1:c.351G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS833536"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1209,
          "referenceAllele": "G",
          "start": 1208
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000370818.8:c.1064G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000359854.3:p.Arg355His",
        "hgvsWellDefined": "ENSP00000359854.3:p.Arg355His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS750683",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000370818.8:c.1064G>A"
          },
          "RefSeq": {
            "hgvs": "NM_004484.4:c.1064G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000359854.3:p.Arg355His"
          },
          "RefSeq": {
            "hgvs": "NP_004475.1:p.Arg355His"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1278,
          "referenceAllele": "G",
          "start": 1277
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000394299.7:c.1133G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000377836.2:p.Arg378His",
        "hgvsWellDefined": "ENSP00000377836.2:p.Arg378His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS753240"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 351,
          "referenceAllele": "G",
          "start": 350
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000666673.1:n.351G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS772951"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 131,
          "referenceAllele": "G",
          "start": 130
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000667662.1:n.131G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS772990"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 110,
          "referenceAllele": "G",
          "start": 109
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000669691.1:n.110G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS773072"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1510,
          "referenceAllele": "G",
          "start": 1509
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000370818.7:c.1064G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000359854.3:p.Arg355His",
        "hgvsWellDefined": "ENSP00000359854.3:p.Arg355His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS268264"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1330,
          "referenceAllele": "G",
          "start": 1329
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000394299.6:c.1133G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000377836.2:p.Arg378His",
        "hgvsWellDefined": "ENSP00000377836.2:p.Arg378His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS276102"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 253,
          "referenceAllele": "G",
          "start": 252
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000406757.2:c.253G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS280728"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 902,
          "referenceAllele": "G",
          "start": 901
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "ENST00000631057.2:c.902G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000486325.1:p.Arg301His",
        "hgvsWellDefined": "ENSP00000486325.1:p.Arg301His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS407469"
    },
    {
      "@id": "http://reg.genome.network/allele/PA915988456",
      "coordinates": [
        {
          "allele": "A",
          "end": 1330,
          "referenceAllele": "G",
          "start": 1329
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "NM_001164617.1:c.1133G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001158089.1:p.Arg378His",
        "hgvsWellDefined": "NP_001158089.1:p.Arg378His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS014601"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825996680",
      "coordinates": [
        {
          "allele": "A",
          "end": 1213,
          "referenceAllele": "G",
          "start": 1212
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "NM_001164618.1:c.1016G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001158090.1:p.Arg339His",
        "hgvsWellDefined": "NP_001158090.1:p.Arg339His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS014602"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825997294",
      "coordinates": [
        {
          "allele": "A",
          "end": 1099,
          "referenceAllele": "G",
          "start": 1098
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "NM_001164619.1:c.902G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001158091.1:p.Arg301His",
        "hgvsWellDefined": "NP_001158091.1:p.Arg301His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS014603"
    },
    {
      "@id": "http://reg.genome.network/allele/PA658819033",
      "coordinates": [
        {
          "allele": "A",
          "end": 1261,
          "referenceAllele": "G",
          "start": 1260
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "NM_004484.3:c.1064G>A",
        "LRG_505t1:c.1064G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_004475.1:p.Arg355His",
        "hgvsWellDefined": "NP_004475.1:p.Arg355His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS029644"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1231,
          "referenceAllele": "G",
          "start": 1230
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "XM_017029413.2:c.1064G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016884902.1:p.Arg355His",
        "hgvsWellDefined": "XP_016884902.1:p.Arg355His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS578957"
    },
    {
      "@id": "http://reg.genome.network/allele/PA915988456",
      "coordinates": [
        {
          "allele": "A",
          "end": 1278,
          "referenceAllele": "G",
          "start": 1277
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "NM_001164617.2:c.1133G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001158089.1:p.Arg378His",
        "hgvsWellDefined": "NP_001158089.1:p.Arg378His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS678349"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825996680",
      "coordinates": [
        {
          "allele": "A",
          "end": 1161,
          "referenceAllele": "G",
          "start": 1160
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "NM_001164618.2:c.1016G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001158090.1:p.Arg339His",
        "hgvsWellDefined": "NP_001158090.1:p.Arg339His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS678350"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825997294",
      "coordinates": [
        {
          "allele": "A",
          "end": 1047,
          "referenceAllele": "G",
          "start": 1046
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "NM_001164619.2:c.902G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001158091.1:p.Arg301His",
        "hgvsWellDefined": "NP_001158091.1:p.Arg301His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS678351"
    },
    {
      "@id": "http://reg.genome.network/allele/PA658819033",
      "coordinates": [
        {
          "allele": "A",
          "end": 1209,
          "referenceAllele": "G",
          "start": 1208
        }
      ],
      "gene": "http://reg.genome.network/gene/GN004451",
      "geneNCBI_id": 2719,
      "geneSymbol": "GPC3",
      "hgvs": [
        "NM_004484.4:c.1064G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_004475.1:p.Arg355His",
        "hgvsWellDefined": "NP_004475.1:p.Arg355His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS696153",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000370818.8:c.1064G>A"
          },
          "RefSeq": {
            "hgvs": "NM_004484.4:c.1064G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000359854.3:p.Arg355His"
          },
          "RefSeq": {
            "hgvs": "NP_004475.1:p.Arg355His"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}