{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA414631096",
  "communityStandardTitle": [
    "NM_000276.4(OCRL):c.2389G>C (p.Ala797Pro)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=574268[alleleid]",
        "alleleId": 574268,
        "preferredName": "NM_000276.4(OCRL):c.2389G>C (p.Ala797Pro)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/567454",
        "RCV": [
          "RCV000687544"
        ],
        "variationId": 567454
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.128722910G>C?assembly=hg19",
        "id": "chrX:g.128722910G>C"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.129588933G>C?assembly=hg38",
        "id": "chrX:g.129588933G>C"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/935956958",
        "rs": 935956958
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 129588933,
          "referenceAllele": "G",
          "start": 129588932
        }
      ],
      "hgvs": [
        "NC_000023.11:g.129588933G>C",
        "CM000685.2:g.129588933G>C"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000071"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 128722910,
          "referenceAllele": "G",
          "start": 128722909
        }
      ],
      "hgvs": [
        "NC_000023.10:g.128722910G>C",
        "CM000685.1:g.128722910G>C"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000047"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 128550591,
          "referenceAllele": "G",
          "start": 128550590
        }
      ],
      "hgvs": [
        "NC_000023.9:g.128550591G>C"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000023"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 53659,
          "referenceAllele": "G",
          "start": 53658
        }
      ],
      "hgvs": [
        "NG_008638.1:g.53659G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001137"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2506,
          "referenceAllele": "G",
          "start": 2505
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000693473.1:c.2506G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS834263"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2570,
          "referenceAllele": "G",
          "start": 2569
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000371113.9:c.2389G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000360154.4:p.Ala797Pro",
        "hgvsWellDefined": "ENSP00000360154.4:p.Ala797Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS750725",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000371113.9:c.2389G>C"
          },
          "RefSeq": {
            "hgvs": "NM_000276.4:c.2389G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000360154.4:p.Ala797Pro"
          },
          "RefSeq": {
            "hgvs": "NP_000267.2:p.Ala797Pro"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2437,
          "referenceAllele": "G",
          "start": 2436
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000646010.1:c.2437G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS768650"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1566,
          "referenceAllele": "G",
          "start": 1565
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000646914.1:c.1566G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS769135"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1940,
          "referenceAllele": "G",
          "start": 1939
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000647245.1:c.1940G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS769311"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2530,
          "referenceAllele": "G",
          "start": 2529
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000357121.5:c.2365G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000349635.5:p.Ala789Pro",
        "hgvsWellDefined": "ENSP00000349635.5:p.Ala789Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS263990"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2554,
          "referenceAllele": "G",
          "start": 2553
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000371113.8:c.2389G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000360154.4:p.Ala797Pro",
        "hgvsWellDefined": "ENSP00000360154.4:p.Ala797Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS268420"
    },
    {
      "@id": "http://reg.genome.network/allele/PA891845345",
      "coordinates": [
        {
          "allele": "C",
          "end": 2554,
          "referenceAllele": "G",
          "start": 2553
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_000276.3:c.2389G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000267.2:p.Ala797Pro",
        "hgvsWellDefined": "NP_000267.2:p.Ala797Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006338"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2829332135",
      "coordinates": [
        {
          "allele": "C",
          "end": 2530,
          "referenceAllele": "G",
          "start": 2529
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001587.3:c.2365G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001578.2:p.Ala789Pro",
        "hgvsWellDefined": "NP_001578.2:p.Ala789Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS026944"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2361,
          "referenceAllele": "G",
          "start": 2360
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_005262422.1:c.1918G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005262479.1:p.Ala640Pro",
        "hgvsWellDefined": "XP_005262479.1:p.Ala640Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS063448"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2571,
          "referenceAllele": "G",
          "start": 2570
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531342.1:c.2392G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529644.1:p.Ala798Pro",
        "hgvsWellDefined": "XP_011529644.1:p.Ala798Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098378"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2460,
          "referenceAllele": "G",
          "start": 2459
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531343.1:c.2368G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529645.1:p.Ala790Pro",
        "hgvsWellDefined": "XP_011529645.1:p.Ala790Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098379"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2463,
          "referenceAllele": "G",
          "start": 2462
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531344.1:c.2245G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529646.1:p.Ala749Pro",
        "hgvsWellDefined": "XP_011529646.1:p.Ala749Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098380"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2479,
          "referenceAllele": "G",
          "start": 2478
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531345.1:c.2245G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529647.1:p.Ala749Pro",
        "hgvsWellDefined": "XP_011529647.1:p.Ala749Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098381"
    },
    {
      "@id": "http://reg.genome.network/allele/PA916022635",
      "coordinates": [
        {
          "allele": "C",
          "end": 2577,
          "referenceAllele": "G",
          "start": 2576
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001318784.1:c.2392G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001305713.1:p.Ala798Pro",
        "hgvsWellDefined": "NP_001305713.1:p.Ala798Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS513020"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2361,
          "referenceAllele": "G",
          "start": 2360
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_005262422.2:c.1918G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005262479.1:p.Ala640Pro",
        "hgvsWellDefined": "XP_005262479.1:p.Ala640Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS535480"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2467,
          "referenceAllele": "G",
          "start": 2466
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531344.3:c.2245G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529646.1:p.Ala749Pro",
        "hgvsWellDefined": "XP_011529646.1:p.Ala749Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS550338"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2470,
          "referenceAllele": "G",
          "start": 2469
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531345.3:c.2245G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529647.1:p.Ala749Pro",
        "hgvsWellDefined": "XP_011529647.1:p.Ala749Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS550339"
    },
    {
      "@id": "http://reg.genome.network/allele/PA891845345",
      "coordinates": [
        {
          "allele": "C",
          "end": 2570,
          "referenceAllele": "G",
          "start": 2569
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_000276.4:c.2389G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000267.2:p.Ala797Pro",
        "hgvsWellDefined": "NP_000267.2:p.Ala797Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS662380",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000371113.9:c.2389G>C"
          },
          "RefSeq": {
            "hgvs": "NM_000276.4:c.2389G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000360154.4:p.Ala797Pro"
          },
          "RefSeq": {
            "hgvs": "NP_000267.2:p.Ala797Pro"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA916022635",
      "coordinates": [
        {
          "allele": "C",
          "end": 2573,
          "referenceAllele": "G",
          "start": 2572
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001318784.2:c.2392G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001305713.1:p.Ala798Pro",
        "hgvsWellDefined": "NP_001305713.1:p.Ala798Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS684598"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2829332135",
      "coordinates": [
        {
          "allele": "C",
          "end": 2546,
          "referenceAllele": "G",
          "start": 2545
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001587.4:c.2365G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001578.2:p.Ala789Pro",
        "hgvsWellDefined": "NP_001578.2:p.Ala789Pro"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS695324"
    }
  ],
  "type": "nucleotide"
}