{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA414620152",
  "communityStandardTitle": [
    "NM_000276.4(OCRL):c.1907T>A (p.Val636Glu)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=677065[alleleid]",
        "alleleId": 677065,
        "preferredName": "NM_000276.4(OCRL):c.1907T>A (p.Val636Glu)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/689472",
        "RCV": [
          "RCV000850187"
        ],
        "variationId": 689472
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.128710321T>A?assembly=hg19",
        "id": "chrX:g.128710321T>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.129576344T>A?assembly=hg38",
        "id": "chrX:g.129576344T>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/1602802472",
        "rs": 1602802472
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "A",
          "end": 129576344,
          "referenceAllele": "T",
          "start": 129576343
        }
      ],
      "hgvs": [
        "NC_000023.11:g.129576344T>A",
        "CM000685.2:g.129576344T>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000071"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "A",
          "end": 128710321,
          "referenceAllele": "T",
          "start": 128710320
        }
      ],
      "hgvs": [
        "NC_000023.10:g.128710321T>A",
        "CM000685.1:g.128710321T>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000047"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "A",
          "end": 128538002,
          "referenceAllele": "T",
          "start": 128538001
        }
      ],
      "hgvs": [
        "NC_000023.9:g.128538002T>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000023"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 41070,
          "referenceAllele": "T",
          "start": 41069
        }
      ],
      "hgvs": [
        "NG_008638.1:g.41070T>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001137"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2477,
          "referenceAllele": "T",
          "start": 2476
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000691455.1:c.*2199T>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000510265.1:n.*2199T>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS833224"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2024,
          "referenceAllele": "T",
          "start": 2023
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000693473.1:c.2024T>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS834263"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2088,
          "referenceAllele": "T",
          "start": 2087
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000371113.9:c.1907T>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000360154.4:p.Val636Glu",
        "hgvsWellDefined": "ENSP00000360154.4:p.Val636Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS750725",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000371113.9:c.1907T>A"
          },
          "RefSeq": {
            "hgvs": "NM_000276.4:c.1907T>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000360154.4:p.Val636Glu"
          },
          "RefSeq": {
            "hgvs": "NP_000267.2:p.Val636Glu"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1955,
          "referenceAllele": "T",
          "start": 1954
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000646010.1:c.1955T>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS768650"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1084,
          "referenceAllele": "T",
          "start": 1083
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000646914.1:c.1084T>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS769135"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1458,
          "referenceAllele": "T",
          "start": 1457
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000647245.1:c.1458T>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS769311"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2072,
          "referenceAllele": "T",
          "start": 2071
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000357121.5:c.1907T>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000349635.5:p.Val636Glu",
        "hgvsWellDefined": "ENSP00000349635.5:p.Val636Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS263990"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2072,
          "referenceAllele": "T",
          "start": 2071
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000371113.8:c.1907T>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000360154.4:p.Val636Glu",
        "hgvsWellDefined": "ENSP00000360154.4:p.Val636Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS268420"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825137738",
      "coordinates": [
        {
          "allele": "A",
          "end": 2072,
          "referenceAllele": "T",
          "start": 2071
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_000276.3:c.1907T>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_000267.2:p.Val636Glu",
        "hgvsWellDefined": "NP_000267.2:p.Val636Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006338"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2829332067",
      "coordinates": [
        {
          "allele": "A",
          "end": 2072,
          "referenceAllele": "T",
          "start": 2071
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001587.3:c.1907T>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001578.2:p.Val636Glu",
        "hgvsWellDefined": "NP_001578.2:p.Val636Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS026944"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1879,
          "referenceAllele": "T",
          "start": 1878
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_005262422.1:c.1436T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005262479.1:p.Val479Glu",
        "hgvsWellDefined": "XP_005262479.1:p.Val479Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS063448"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2089,
          "referenceAllele": "T",
          "start": 2088
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531342.1:c.1910T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529644.1:p.Val637Glu",
        "hgvsWellDefined": "XP_011529644.1:p.Val637Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098378"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2002,
          "referenceAllele": "T",
          "start": 2001
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531343.1:c.1910T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529645.1:p.Val637Glu",
        "hgvsWellDefined": "XP_011529645.1:p.Val637Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098379"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1981,
          "referenceAllele": "T",
          "start": 1980
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531344.1:c.1763T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529646.1:p.Val588Glu",
        "hgvsWellDefined": "XP_011529646.1:p.Val588Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098380"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1997,
          "referenceAllele": "T",
          "start": 1996
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531345.1:c.1763T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529647.1:p.Val588Glu",
        "hgvsWellDefined": "XP_011529647.1:p.Val588Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098381"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2004,
          "referenceAllele": "T",
          "start": 2003
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531346.1:c.1910T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529648.1:p.Val637Glu",
        "hgvsWellDefined": "XP_011529648.1:p.Val637Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098382"
    },
    {
      "@id": "http://reg.genome.network/allele/PA916022631",
      "coordinates": [
        {
          "allele": "A",
          "end": 2095,
          "referenceAllele": "T",
          "start": 2094
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001318784.1:c.1910T>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001305713.1:p.Val637Glu",
        "hgvsWellDefined": "NP_001305713.1:p.Val637Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS513020"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1879,
          "referenceAllele": "T",
          "start": 1878
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_005262422.2:c.1436T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005262479.1:p.Val479Glu",
        "hgvsWellDefined": "XP_005262479.1:p.Val479Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS535480"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1985,
          "referenceAllele": "T",
          "start": 1984
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531344.3:c.1763T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529646.1:p.Val588Glu",
        "hgvsWellDefined": "XP_011529646.1:p.Val588Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS550338"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1988,
          "referenceAllele": "T",
          "start": 1987
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531345.3:c.1763T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529647.1:p.Val588Glu",
        "hgvsWellDefined": "XP_011529647.1:p.Val588Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS550339"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2003,
          "referenceAllele": "T",
          "start": 2002
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_017029554.1:c.1907T>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016885043.1:p.Val636Glu",
        "hgvsWellDefined": "XP_016885043.1:p.Val636Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS579074"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825137738",
      "coordinates": [
        {
          "allele": "A",
          "end": 2088,
          "referenceAllele": "T",
          "start": 2087
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_000276.4:c.1907T>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_000267.2:p.Val636Glu",
        "hgvsWellDefined": "NP_000267.2:p.Val636Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS662380",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000371113.9:c.1907T>A"
          },
          "RefSeq": {
            "hgvs": "NM_000276.4:c.1907T>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000360154.4:p.Val636Glu"
          },
          "RefSeq": {
            "hgvs": "NP_000267.2:p.Val636Glu"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA916022631",
      "coordinates": [
        {
          "allele": "A",
          "end": 2091,
          "referenceAllele": "T",
          "start": 2090
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001318784.2:c.1910T>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001305713.1:p.Val637Glu",
        "hgvsWellDefined": "NP_001305713.1:p.Val637Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS684598"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2829332067",
      "coordinates": [
        {
          "allele": "A",
          "end": 2088,
          "referenceAllele": "T",
          "start": 2087
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001587.4:c.1907T>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001578.2:p.Val636Glu",
        "hgvsWellDefined": "NP_001578.2:p.Val636Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS695324"
    }
  ],
  "type": "nucleotide"
}