{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA413857661",
  "communityStandardTitle": [
    "NM_033380.3(COL4A5):c.3373G>C (p.Gly1125Arg)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=1065135[alleleid]",
        "alleleId": 1065135,
        "preferredName": "NM_033380.3(COL4A5):c.3373G>C (p.Gly1125Arg)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/1069146",
        "RCV": [
          "RCV001380897"
        ],
        "variationId": 1069146
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.107898687G>C?assembly=hg19",
        "id": "chrX:g.107898687G>C"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.108655457G>C?assembly=hg38",
        "id": "chrX:g.108655457G>C"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/2067822565",
        "rs": 2067822565
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 108655457,
          "referenceAllele": "G",
          "start": 108655456
        }
      ],
      "hgvs": [
        "NC_000023.11:g.108655457G>C",
        "CM000685.2:g.108655457G>C"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000071"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 107898687,
          "referenceAllele": "G",
          "start": 107898686
        }
      ],
      "hgvs": [
        "NC_000023.10:g.107898687G>C",
        "CM000685.1:g.107898687G>C"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000047"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 107785343,
          "referenceAllele": "G",
          "start": 107785342
        }
      ],
      "hgvs": [
        "NC_000023.9:g.107785343G>C"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000023"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 220534,
          "referenceAllele": "G",
          "start": 220533
        }
      ],
      "hgvs": [
        "NG_011977.1:g.220534G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS002082"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 220534,
          "referenceAllele": "G",
          "start": 220533
        }
      ],
      "hgvs": [
        "NG_011977.2:g.220534G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS673573"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3661,
          "referenceAllele": "G",
          "start": 3660
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "ENST00000328300.11:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000331902.7:p.Gly1125Arg",
        "hgvsWellDefined": "ENSP00000331902.7:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS746901",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000328300.11:c.3373G>C"
          },
          "RefSeq": {
            "hgvs": "NM_033380.3:c.3373G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000331902.7:p.Gly1125Arg"
          },
          "RefSeq": {
            "hgvs": "NP_203699.1:p.Gly1125Arg"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3575,
          "referenceAllele": "G",
          "start": 3574
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "ENST00000361603.7:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000354505.2:p.Gly1125Arg",
        "hgvsWellDefined": "ENSP00000354505.2:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS749508"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3617,
          "referenceAllele": "G",
          "start": 3616
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "ENST00000328300.10:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000331902.6:p.Gly1125Arg",
        "hgvsWellDefined": "ENSP00000331902.6:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS258897"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3617,
          "referenceAllele": "G",
          "start": 3616
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "ENST00000361603.6:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000354505.2:p.Gly1125Arg",
        "hgvsWellDefined": "ENSP00000354505.2:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS265564"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825199646",
      "coordinates": [
        {
          "allele": "C",
          "end": 3655,
          "referenceAllele": "G",
          "start": 3654
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "NM_000495.4:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000486.1:p.Gly1125Arg",
        "hgvsWellDefined": "NP_000486.1:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006549"
    },
    {
      "@id": "http://reg.genome.network/allele/PA1139746909",
      "coordinates": [
        {
          "allele": "C",
          "end": 3655,
          "referenceAllele": "G",
          "start": 3654
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "NM_033380.2:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_203699.1:p.Gly1125Arg",
        "hgvsWellDefined": "NP_203699.1:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS039706"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3690,
          "referenceAllele": "G",
          "start": 3689
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_005262070.2:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005262127.1:p.Gly1125Arg",
        "hgvsWellDefined": "XP_005262127.1:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS063311"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3553,
          "referenceAllele": "G",
          "start": 3552
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_006724616.2:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_006724679.1:p.Gly1125Arg",
        "hgvsWellDefined": "XP_006724679.1:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS075622"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3311,
          "referenceAllele": "G",
          "start": 3310
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_011530849.1:c.3049G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529151.1:p.Gly1017Arg",
        "hgvsWellDefined": "XP_011529151.1:p.Gly1017Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS097892"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3690,
          "referenceAllele": "G",
          "start": 3689
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_011530850.1:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529152.1:p.Gly1125Arg",
        "hgvsWellDefined": "XP_011529152.1:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS097893"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1058,
          "referenceAllele": "G",
          "start": 1057
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_011530851.1:c.946G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529153.1:p.Gly316Arg",
        "hgvsWellDefined": "XP_011529153.1:p.Gly316Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS097894"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3403,
          "referenceAllele": "G",
          "start": 3402
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_011530849.2:c.3388G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529151.2:p.Gly1130Arg",
        "hgvsWellDefined": "XP_011529151.2:p.Gly1130Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS550135"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3403,
          "referenceAllele": "G",
          "start": 3402
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_017029259.2:c.3388G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_016884748.1:p.Gly1130Arg",
        "hgvsWellDefined": "XP_016884748.1:p.Gly1130Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS578835"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3403,
          "referenceAllele": "G",
          "start": 3402
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_017029260.1:c.3388G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_016884749.1:p.Gly1130Arg",
        "hgvsWellDefined": "XP_016884749.1:p.Gly1130Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS578836"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3403,
          "referenceAllele": "G",
          "start": 3402
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_017029261.1:c.3388G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_016884750.1:p.Gly1130Arg",
        "hgvsWellDefined": "XP_016884750.1:p.Gly1130Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS578837"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3403,
          "referenceAllele": "G",
          "start": 3402
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_017029262.2:c.3388G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_016884751.1:p.Gly1130Arg",
        "hgvsWellDefined": "XP_016884751.1:p.Gly1130Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS578838"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2487,
          "referenceAllele": "G",
          "start": 2486
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "XM_017029263.2:c.1708G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_016884752.1:p.Gly570Arg",
        "hgvsWellDefined": "XP_016884752.1:p.Gly570Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS578839"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825199646",
      "coordinates": [
        {
          "allele": "C",
          "end": 3661,
          "referenceAllele": "G",
          "start": 3660
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "NM_000495.5:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000486.1:p.Gly1125Arg",
        "hgvsWellDefined": "NP_000486.1:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS674868"
    },
    {
      "@id": "http://reg.genome.network/allele/PA1139746909",
      "coordinates": [
        {
          "allele": "C",
          "end": 3661,
          "referenceAllele": "G",
          "start": 3660
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002207",
      "geneNCBI_id": 1287,
      "geneSymbol": "COL4A5",
      "hgvs": [
        "NM_033380.3:c.3373G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_203699.1:p.Gly1125Arg",
        "hgvsWellDefined": "NP_203699.1:p.Gly1125Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS699344",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000328300.11:c.3373G>C"
          },
          "RefSeq": {
            "hgvs": "NM_033380.3:c.3373G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000331902.7:p.Gly1125Arg"
          },
          "RefSeq": {
            "hgvs": "NP_203699.1:p.Gly1125Arg"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}