{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA412575362",
  "communityStandardTitle": [
    "NM_000444.6(PHEX):c.2156G>C (p.Gly719Ala)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=2832554[alleleid]",
        "alleleId": 2832554,
        "preferredName": "NM_000444.6(PHEX):c.2156G>C (p.Gly719Ala)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/2664984",
        "RCV": [
          "RCV003448534"
        ],
        "variationId": 2664984
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.22265976G>C?assembly=hg19",
        "id": "chrX:g.22265976G>C"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.22247859G>C?assembly=hg38",
        "id": "chrX:g.22247859G>C"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/2518713623",
        "rs": 2518713623
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 22247859,
          "referenceAllele": "G",
          "start": 22247858
        }
      ],
      "hgvs": [
        "NC_000023.11:g.22247859G>C",
        "CM000685.2:g.22247859G>C"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000071"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 22265976,
          "referenceAllele": "G",
          "start": 22265975
        }
      ],
      "hgvs": [
        "NC_000023.10:g.22265976G>C",
        "CM000685.1:g.22265976G>C"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000047"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 22175897,
          "referenceAllele": "G",
          "start": 22175896
        }
      ],
      "hgvs": [
        "NC_000023.9:g.22175897G>C"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000023"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 220056,
          "referenceAllele": "G",
          "start": 220055
        }
      ],
      "hgvs": [
        "NG_007563.2:g.220056G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS000650"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1042,
          "referenceAllele": "G",
          "start": 1041
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000683162.1:c.*94G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000508059.1:n.*94G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS828146"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 942,
          "endIntronDirection": "+",
          "endIntronOffset": 20248,
          "referenceAllele": "G",
          "start": 942,
          "startIntronDirection": "+",
          "startIntronOffset": 20247
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000683289.1:c.624+20248G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000508195.1:n.624+20248G>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS828270"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 940,
          "referenceAllele": "G",
          "start": 939
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000683917.1:n.940G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS828883"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 988,
          "referenceAllele": "G",
          "start": 987
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000684356.1:c.710G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000507619.1:p.Gly237Ala",
        "hgvsWellDefined": "ENSP00000507619.1:p.Gly237Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS829311"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1830,
          "referenceAllele": "G",
          "start": 1829
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000684745.1:n.1830G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS829696"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2837,
          "referenceAllele": "G",
          "start": 2836
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000379374.5:c.2156G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000368682.4:p.Gly719Ala",
        "hgvsWellDefined": "ENSP00000368682.4:p.Gly719Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS752217",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000379374.5:c.2156G>C"
          },
          "RefSeq": {
            "hgvs": "NM_000444.6:c.2156G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000368682.4:p.Gly719Ala"
          },
          "RefSeq": {
            "hgvs": "NP_000435.3:p.Gly719Ala"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2721,
          "referenceAllele": "G",
          "start": 2720
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000379374.4:c.2156G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000368682.4:p.Gly719Ala",
        "hgvsWellDefined": "ENSP00000368682.4:p.Gly719Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS272467"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825172345",
      "coordinates": [
        {
          "allele": "C",
          "end": 2718,
          "referenceAllele": "G",
          "start": 2717
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "NM_000444.5:c.2156G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000435.3:p.Gly719Ala",
        "hgvsWellDefined": "NP_000435.3:p.Gly719Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006506"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2741852429",
      "coordinates": [
        {
          "allele": "C",
          "end": 2641,
          "referenceAllele": "G",
          "start": 2640
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "NM_001282754.1:c.2079G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001269683.1:p.Trp693Cys",
        "hgvsWellDefined": "NP_001269683.1:p.Trp693Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS022224"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1527,
          "referenceAllele": "G",
          "start": 1526
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_011545533.1:c.1400G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543835.1:p.Gly467Ala",
        "hgvsWellDefined": "XP_011543835.1:p.Gly467Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112433"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1556,
          "referenceAllele": "G",
          "start": 1555
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_011545534.1:c.1400G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543836.1:p.Gly467Ala",
        "hgvsWellDefined": "XP_011543836.1:p.Gly467Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112434"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1178,
          "referenceAllele": "G",
          "start": 1177
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_011545536.1:c.1049G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543838.1:p.Gly350Ala",
        "hgvsWellDefined": "XP_011543838.1:p.Gly350Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112436"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 140,
          "endIntronDirection": "+",
          "endIntronOffset": 6080,
          "referenceAllele": "C",
          "start": 140,
          "startIntronDirection": "+",
          "startIntronOffset": 6079
        }
      ],
      "hgvs": [
        "XR_950533.1:n.140+6080C>G"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS143594"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 127,
          "endIntronDirection": "+",
          "endIntronOffset": 6080,
          "referenceAllele": "C",
          "start": 127,
          "startIntronDirection": "+",
          "startIntronOffset": 6079
        }
      ],
      "hgvs": [
        "XR_950534.1:n.127+6080C>G"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS143595"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 850,
          "endIntronDirection": "+",
          "endIntronOffset": 6080,
          "referenceAllele": "C",
          "start": 850,
          "startIntronDirection": "+",
          "startIntronOffset": 6079
        }
      ],
      "gene": "http://reg.genome.network/gene/GN037703",
      "geneNCBI_id": 100873065,
      "geneSymbol": "PTCHD1-AS",
      "hgvs": [
        "NR_073010.2:n.850+6080C>G"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS527308"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1560,
          "referenceAllele": "G",
          "start": 1559
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_011545536.2:c.1049G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543838.1:p.Gly350Ala",
        "hgvsWellDefined": "XP_011543838.1:p.Gly350Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS556129"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1528,
          "referenceAllele": "G",
          "start": 1527
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_017029579.1:c.1400G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_016885068.1:p.Gly467Ala",
        "hgvsWellDefined": "XP_016885068.1:p.Gly467Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS579097"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2258,
          "referenceAllele": "G",
          "start": 2257
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_024452390.1:c.1865G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_024308158.1:p.Gly622Ala",
        "hgvsWellDefined": "XP_024308158.1:p.Gly622Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS585885"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2996,
          "referenceAllele": "G",
          "start": 2995
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XR_001755695.1:n.2996G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS601328"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825172345",
      "coordinates": [
        {
          "allele": "C",
          "end": 2837,
          "referenceAllele": "G",
          "start": 2836
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "NM_000444.6:c.2156G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000435.3:p.Gly719Ala",
        "hgvsWellDefined": "NP_000435.3:p.Gly719Ala"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS662448",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000379374.5:c.2156G>C"
          },
          "RefSeq": {
            "hgvs": "NM_000444.6:c.2156G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000368682.4:p.Gly719Ala"
          },
          "RefSeq": {
            "hgvs": "NP_000435.3:p.Gly719Ala"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA2741852429",
      "coordinates": [
        {
          "allele": "C",
          "end": 2760,
          "referenceAllele": "G",
          "start": 2759
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "NM_001282754.2:c.2079G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001269683.1:p.Trp693Cys",
        "hgvsWellDefined": "NP_001269683.1:p.Trp693Cys"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS681890"
    }
  ],
  "type": "nucleotide"
}