{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA412574202",
  "communityStandardTitle": [
    "NM_000444.6(PHEX):c.1936G>C (p.Asp646His)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=432183[alleleid]",
        "alleleId": 432183,
        "preferredName": "NM_000444.6(PHEX):c.1936G>C (p.Asp646His)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/438510",
        "RCV": [
          "RCV000505472",
          "RCV001207802"
        ],
        "variationId": 438510
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.22244596G>C?assembly=hg19",
        "id": "chrX:g.22244596G>C"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.22226479G>C?assembly=hg38",
        "id": "chrX:g.22226479G>C"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/1556148532",
        "rs": 1556148532
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 22226479,
          "referenceAllele": "G",
          "start": 22226478
        }
      ],
      "hgvs": [
        "NC_000023.11:g.22226479G>C",
        "CM000685.2:g.22226479G>C"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000071"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 22244596,
          "referenceAllele": "G",
          "start": 22244595
        }
      ],
      "hgvs": [
        "NC_000023.10:g.22244596G>C",
        "CM000685.1:g.22244596G>C"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000047"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 22154517,
          "referenceAllele": "G",
          "start": 22154516
        }
      ],
      "hgvs": [
        "NC_000023.9:g.22154517G>C"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000023"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 198676,
          "referenceAllele": "G",
          "start": 198675
        }
      ],
      "hgvs": [
        "NG_007563.2:g.198676G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS000650"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 624,
          "referenceAllele": "G",
          "start": 623
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000682888.1:c.490G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000508003.1:p.Asp164His",
        "hgvsWellDefined": "ENSP00000508003.1:p.Asp164His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS827876"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 697,
          "referenceAllele": "G",
          "start": 696
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000683162.1:c.490G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000508059.1:p.Asp164His",
        "hgvsWellDefined": "ENSP00000508059.1:p.Asp164His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS828146"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 808,
          "referenceAllele": "G",
          "start": 807
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000683289.1:c.490G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000508195.1:p.Asp164His",
        "hgvsWellDefined": "ENSP00000508195.1:p.Asp164His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS828270"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 720,
          "referenceAllele": "G",
          "start": 719
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000683917.1:n.720G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS828883"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 768,
          "referenceAllele": "G",
          "start": 767
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000684356.1:c.490G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000507619.1:p.Asp164His",
        "hgvsWellDefined": "ENSP00000507619.1:p.Asp164His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS829311"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1610,
          "referenceAllele": "G",
          "start": 1609
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000684745.1:n.1610G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS829696"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2617,
          "referenceAllele": "G",
          "start": 2616
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000379374.5:c.1936G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000368682.4:p.Asp646His",
        "hgvsWellDefined": "ENSP00000368682.4:p.Asp646His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS752217",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000379374.5:c.1936G>C"
          },
          "RefSeq": {
            "hgvs": "NM_000444.6:c.1936G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000368682.4:p.Asp646His"
          },
          "RefSeq": {
            "hgvs": "NP_000435.3:p.Asp646His"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2501,
          "referenceAllele": "G",
          "start": 2500
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "ENST00000379374.4:c.1936G>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000368682.4:p.Asp646His",
        "hgvsWellDefined": "ENSP00000368682.4:p.Asp646His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS272467"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645511088",
      "coordinates": [
        {
          "allele": "C",
          "end": 2498,
          "referenceAllele": "G",
          "start": 2497
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "NM_000444.5:c.1936G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000435.3:p.Asp646His",
        "hgvsWellDefined": "NP_000435.3:p.Asp646His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006506"
    },
    {
      "@id": "http://reg.genome.network/allele/PA916014004",
      "coordinates": [
        {
          "allele": "C",
          "end": 2498,
          "referenceAllele": "G",
          "start": 2497
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "NM_001282754.1:c.1936G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001269683.1:p.Asp646His",
        "hgvsWellDefined": "NP_001269683.1:p.Asp646His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS022224"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1307,
          "referenceAllele": "G",
          "start": 1306
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_011545533.1:c.1180G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543835.1:p.Asp394His",
        "hgvsWellDefined": "XP_011543835.1:p.Asp394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112433"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1336,
          "referenceAllele": "G",
          "start": 1335
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_011545534.1:c.1180G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543836.1:p.Asp394His",
        "hgvsWellDefined": "XP_011543836.1:p.Asp394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112434"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 958,
          "referenceAllele": "G",
          "start": 957
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_011545536.1:c.829G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543838.1:p.Asp277His",
        "hgvsWellDefined": "XP_011543838.1:p.Asp277His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS112436"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 325,
          "endIntronDirection": "-",
          "endIntronOffset": 455,
          "referenceAllele": "C",
          "start": 325,
          "startIntronDirection": "-",
          "startIntronOffset": 456
        }
      ],
      "hgvs": [
        "XR_950534.1:n.326-456C>G"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS143595"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 1048,
          "endIntronDirection": "+",
          "endIntronOffset": 991,
          "referenceAllele": "C",
          "start": 1048,
          "startIntronDirection": "+",
          "startIntronOffset": 990
        }
      ],
      "gene": "http://reg.genome.network/gene/GN037703",
      "geneNCBI_id": 100873065,
      "geneSymbol": "PTCHD1-AS",
      "hgvs": [
        "NR_073010.2:n.1048+991C>G"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS527308"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1340,
          "referenceAllele": "G",
          "start": 1339
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_011545536.2:c.829G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011543838.1:p.Asp277His",
        "hgvsWellDefined": "XP_011543838.1:p.Asp277His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS556129"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1308,
          "referenceAllele": "G",
          "start": 1307
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_017029579.1:c.1180G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_016885068.1:p.Asp394His",
        "hgvsWellDefined": "XP_016885068.1:p.Asp394His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS579097"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2038,
          "referenceAllele": "G",
          "start": 2037
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XM_024452390.1:c.1645G>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_024308158.1:p.Asp549His",
        "hgvsWellDefined": "XP_024308158.1:p.Asp549His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS585885"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2776,
          "referenceAllele": "G",
          "start": 2775
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "XR_001755695.1:n.2776G>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS601328"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645511088",
      "coordinates": [
        {
          "allele": "C",
          "end": 2617,
          "referenceAllele": "G",
          "start": 2616
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "NM_000444.6:c.1936G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000435.3:p.Asp646His",
        "hgvsWellDefined": "NP_000435.3:p.Asp646His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS662448",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000379374.5:c.1936G>C"
          },
          "RefSeq": {
            "hgvs": "NM_000444.6:c.1936G>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000368682.4:p.Asp646His"
          },
          "RefSeq": {
            "hgvs": "NP_000435.3:p.Asp646His"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA916014004",
      "coordinates": [
        {
          "allele": "C",
          "end": 2617,
          "referenceAllele": "G",
          "start": 2616
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008918",
      "geneNCBI_id": 5251,
      "geneSymbol": "PHEX",
      "hgvs": [
        "NM_001282754.2:c.1936G>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001269683.1:p.Asp646His",
        "hgvsWellDefined": "NP_001269683.1:p.Asp646His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS681890"
    }
  ],
  "type": "nucleotide"
}