{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA410422912",
  "communityStandardTitle": [
    "NM_000383.4(AIRE):c.2T>G (p.Met1Arg)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=1429498[alleleid]",
        "alleleId": 1429498,
        "preferredName": "NM_000383.4(AIRE):c.2T>G (p.Met1Arg)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/1451244",
        "RCV": [
          "RCV002007164"
        ],
        "variationId": 1451244
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr21:g.45705891T>G?assembly=hg19",
        "id": "chr21:g.45705891T>G"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr21:g.44286008T>G?assembly=hg38",
        "id": "chr21:g.44286008T>G"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/2146374989",
        "rs": 2146374989
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "21",
      "coordinates": [
        {
          "allele": "G",
          "end": 44286008,
          "referenceAllele": "T",
          "start": 44286007
        }
      ],
      "hgvs": [
        "NC_000021.9:g.44286008T>G",
        "CM000683.2:g.44286008T>G"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000069"
    },
    {
      "chromosome": "21",
      "coordinates": [
        {
          "allele": "G",
          "end": 45705891,
          "referenceAllele": "T",
          "start": 45705890
        }
      ],
      "hgvs": [
        "NC_000021.8:g.45705891T>G",
        "CM000683.1:g.45705891T>G"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000045"
    },
    {
      "chromosome": "21",
      "coordinates": [
        {
          "allele": "G",
          "end": 44530319,
          "referenceAllele": "T",
          "start": 44530318
        }
      ],
      "hgvs": [
        "NC_000021.7:g.44530319T>G"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000021"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 5129,
          "referenceAllele": "T",
          "start": 5128
        }
      ],
      "hgvs": [
        "NG_009556.1:g.5129T>G",
        "LRG_18:g.5129T>G"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001608"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 133,
          "referenceAllele": "T",
          "start": 132
        }
      ],
      "gene": "http://reg.genome.network/gene/GN000360",
      "geneNCBI_id": 326,
      "geneSymbol": "AIRE",
      "hgvs": [
        "ENST00000291582.6:c.2T>G"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000291582.5:p.Met1Arg",
        "hgvsWellDefined": "ENSP00000291582.5:p.Met1Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS744080",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000291582.6:c.2T>G"
          },
          "RefSeq": {
            "hgvs": "NM_000383.4:c.2T>G"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000291582.5:p.Met1Arg"
          },
          "RefSeq": {
            "hgvs": "NP_000374.1:p.Met1Arg"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 129,
          "referenceAllele": "T",
          "start": 128
        }
      ],
      "gene": "http://reg.genome.network/gene/GN000360",
      "geneNCBI_id": 326,
      "geneSymbol": "AIRE",
      "hgvs": [
        "ENST00000291582.5:c.2T>G"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000291582.5:p.Met1Arg",
        "hgvsWellDefined": "ENSP00000291582.5:p.Met1Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS253743"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 163,
          "referenceAllele": "T",
          "start": 162
        }
      ],
      "gene": "http://reg.genome.network/gene/GN000360",
      "geneNCBI_id": 326,
      "geneSymbol": "AIRE",
      "hgvs": [
        "ENST00000527919.5:n.163T>G"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS353536"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 171,
          "referenceAllele": "T",
          "start": 170
        }
      ],
      "gene": "http://reg.genome.network/gene/GN000360",
      "geneNCBI_id": 326,
      "geneSymbol": "AIRE",
      "hgvs": [
        "ENST00000530812.5:n.171T>G"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS356007"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2573166447",
      "coordinates": [
        {
          "allele": "G",
          "end": 171,
          "referenceAllele": "T",
          "start": 170
        }
      ],
      "gene": "http://reg.genome.network/gene/GN000360",
      "geneNCBI_id": 326,
      "geneSymbol": "AIRE",
      "hgvs": [
        "NM_000383.3:c.2T>G"
      ],
      "proteinEffect": {
        "hgvs": "NP_000374.1:p.Met1Arg",
        "hgvsWellDefined": "NP_000374.1:p.Met1Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006445"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 163,
          "referenceAllele": "T",
          "start": 162
        }
      ],
      "gene": "http://reg.genome.network/gene/GN000360",
      "geneNCBI_id": 326,
      "geneSymbol": "AIRE",
      "hgvs": [
        "XM_011529551.1:c.2T>G"
      ],
      "proteinEffect": {
        "hgvs": "XP_011527853.1:p.Met1Arg",
        "hgvsWellDefined": "XP_011527853.1:p.Met1Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS096620"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2573166447",
      "coordinates": [
        {
          "allele": "G",
          "end": 133,
          "referenceAllele": "T",
          "start": 132
        }
      ],
      "gene": "http://reg.genome.network/gene/GN000360",
      "geneNCBI_id": 326,
      "geneSymbol": "AIRE",
      "hgvs": [
        "NM_000383.4:c.2T>G"
      ],
      "proteinEffect": {
        "hgvs": "NP_000374.1:p.Met1Arg",
        "hgvsWellDefined": "NP_000374.1:p.Met1Arg"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS662419",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000291582.6:c.2T>G"
          },
          "RefSeq": {
            "hgvs": "NM_000383.4:c.2T>G"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000291582.5:p.Met1Arg"
          },
          "RefSeq": {
            "hgvs": "NP_000374.1:p.Met1Arg"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}